Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc213025g00001 ATGGCTAATTGCAGTTCAAATCCACAAGATCTGAATTCTACCCATGAGTTAGGGCAATTGGAAGAGCAAATGGAGGGATCAGTCCAATTTTTCTATGTAATGTTGATGAAGAGCAAGGTTGGGATGACATTTGTATCATGTACAGAAGCTAATGATTTCTACAAGGAGTATGCTAAACGAGCTGGATTTGCTACTAAAATTCGAAATTTACAGAGGAATAAAGAGACCGGTGCAATCAAGAATCAACTCTTCACATGCAACAGAGAGGGGAAAAGAAAATCTGACATACCTGAAGCGGAGAAGACGAATCCGATGTCTCCGGCAAATTGTCCTGCAAGGATGTTCGTCCATATTGAGAAGAAGACTTAA 369 0.4011 MANCSSNPQDLNSTHELGQLEEQMEGSVQFFYVMLMKSKVGMTFVSCTEANDFYKEYAKRAGFATKIRNLQRNKETGAIKNQLFTCNREGKRKSDIPEAEKTNPMSPANCPARMFVHIEKKT 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc213025g00001 122 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 33 119 - -
Stsc213025g00001 122 MobiDBLite consensus disorder prediction 91 110 - -
Stsc213025g00001 122 Pfam FAR1 DNA-binding domain 52 120 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc213025g00001 Stsc-Chr213025 10159 11192 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc213025g00001 FAR1 1.6e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc213025g00001 - K17604 ahf:112762851 92.0485