Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc213021g00002 ATGATCTCCTGTAGTAAGCAGGCTAAGTTAGTTCTTCCCAATGGAGGGATTCATGGAATGACAACAGAAGCCATGAGATATGTCAAGTTATTCTGTCTGTCACAAGAGAAATGGGAGCCAGTTTCACAAGAATACCTCCATGATTCTAACAGAGCTGAAACATCGTTTTCATTGTCCCCCGAGATGGGTTCAATGTTGAAGCATTTAGAGAGAAAACTGAGAACTAACTGCAAGAACTACAAGGATCCCGCTTTGCGCTATTTCTTCATGATGATTAATAGGAGATTCATACAAATCTTTGTAGAAGAATGCCATTTAATAACCTATTTGAGCAATGATTGGTTCCAAAATAATGCACAGAAAGCTCAAGAAAACCTTGAGCTCTATTACCGAAGCTCATGGAACAAGGTGGTTGATTATCTGAAGCTGTGCAACGATGAGTCTTTGGTGCATGATGTTGCTACTGAACCAATGAAAGAGAAACTTCTTTTGTTCAATTCACACTTCAAGAAGATATGCGCACTTCAATCTACATGGCTTATTCATAATGAGAAAATTAGGAAAGAAATAATAACATCCGTAGAGAACATGTTGCTTCCTGCATATGGAAAATTCATCGGAAAGTTCCATGATGTTCTTGCTAAAGATGCATATGAAACCTCATCGATTCCCTCAAGCTCTTTCTCTCCACCAAACTCTCCTCCCGCCCTCACCGGCCGCTTCTCCACCGACTCCACCAGCCATATTCACATCATGACGTTGGAGTTGATTTCATCCCCGCGGCCCCGCCAATAA 795 0.4126 MISCSKQAKLVLPNGGIHGMTTEAMRYVKLFCLSQEKWEPVSQEYLHDSNRAETSFSLSPEMGSMLKHLERKLRTNCKNYKDPALRYFFMMINRRFIQIFVEECHLITYLSNDWFQNNAQKAQENLELYYRSSWNKVVDYLKLCNDESLVHDVATEPMKEKLLLFNSHFKKICALQSTWLIHNEKIRKEIITSVENMLLPAYGKFIGKFHDVLAKDAYETSSIPSSSFSPPNSPPALTGRFSTDSTSHIHIMTLELISSPRPRQ 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc213021g00002 264 Pfam Exo70 exocyst complex subunit 9 213 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc213021g00002 264 SUPERFAMILY Cullin repeat-like 7 212 IPR016159 -
Stsc213021g00002 264 MobiDBLite consensus disorder prediction 221 243 - -
Stsc213021g00002 264 PANTHER EXOCYST COMPLEX PROTEIN EXO70 8 215 IPR004140 GO:0000145|GO:0006887
Stsc213021g00002 264 Gene3D Exocyst complex component Exo70 2 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc213021g00002 Stsc-Chr213021 2442 3339 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc213021g00002 8 212 EXO70 exocyst subunit family AT5G58430 36.098 7.46e-34 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc213021g00002 - K07195 aip:107607033 260.766