Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc213021g00001 ATGAGACCTCTGTCTATCCAAATTCGAAGATGTCTTATGCATCCGGATCTATGGAGACTCATTGGTTTTGCTTCATCCATAGTCGGACTGCTCTGTTATGCTCTCAGTACATCCTTCAACTTTCTCTTCGGAAAATGGAACTTGCCGAAAATATCAGTTTACATTGTTTTCAGTTTTATAATCTGCCTTGCCACTTTCTTTGCCAAGGTATTTCAACACTCTGCAAGTCTCCGATTGAGAGCTCATATGGCATTTTTAGTTCTGACTGTTACTTCTATTTACTCATTCTTTTTCGACAAAGCTGTGACCGGGAAACCGGATGCATATAGCATATTTTCTTGTGCTTCTTTTGCGATTATGTCGTTTAGCTTGTCAAGACAAATTGACTGTGGATTTGAGGGAGTTCTCATCATACAACTGATGAAGATAAAATTGTTGTTGGGTATAGTTGCCATATGTTTCAGCTATTTCCTCATCATTCTTCGATCCTCTCTAGATGCACAAACAGTCACAGTCACAGATAGTGAATATTTGGAACTCCGGGATCAAAATCATGTGGCAATTCAAGTGGAATCTGGTCCCCAACAATTCAATATTGATGGAGTCAGAGTCATCATGACAAAGCTCATGGATTGTGTTGAGGCACTTCAGCAGAGAAAATCTGCACTAGTGCAAACCATTGCTGAGGAATACAAAAATGCTGCCTATAACTCCGGGTTGGTGACTGACAACAACTTCTTGCTTGACATGCTGCCACGGGGAATTTTAAATGACCTTCATGAAGCTGCCAAATCCACAGTGGCTGTTGGATTGGAGAAGGAGTGCTCTGATGCCTACATCAATTGCCGGAGGGAATGCTTGGAAGAGTGTCTAACAAGCTTGTTGCAGTTAGGAACTATCAAAATTGACCACCCTAGCACAGCTAGATCTCTAAATTTCATGGTTAGGAGATGGGCGGTAACATGCAATGTAGCTCTCAAAATACTGTTTCCGTCTGAAAGACAACTCTGCGGCCGTGTCTTCTGGGCTACGTTCCATTGCTGA 1044 0.4195 MRPLSIQIRRCLMHPDLWRLIGFASSIVGLLCYALSTSFNFLFGKWNLPKISVYIVFSFIICLATFFAKVFQHSASLRLRAHMAFLVLTVTSIYSFFFDKAVTGKPDAYSIFSCASFAIMSFSLSRQIDCGFEGVLIIQLMKIKLLLGIVAICFSYFLIILRSSLDAQTVTVTDSEYLELRDQNHVAIQVESGPQQFNIDGVRVIMTKLMDCVEALQQRKSALVQTIAEEYKNAAYNSGLVTDNNFLLDMLPRGILNDLHEAAKSTVAVGLEKECSDAYINCRRECLEECLTSLLQLGTIKIDHPSTARSLNFMVRRWAVTCNVALKILFPSERQLCGRVFWATFHC 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc213021g00001 347 PANTHER EXOCYST COMPLEX PROTEIN EXO70 201 342 IPR004140 GO:0000145|GO:0006887
Stsc213021g00001 347 Gene3D Exocyst complex component Exo70 180 346 - -
Stsc213021g00001 347 SUPERFAMILY Cullin repeat-like 191 343 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc213021g00001 Stsc-Chr213021 1137 2204 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc213021g00001 241 343 EXO70 exocyst subunit family AT5G58430 46.154 7.13e-22 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc213021g00001 - - aip:107607033 504.212