Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212984g00003 ATGAAAAGTTTTAGCCCTTCCTATGATGCTTTGAGAAATTCCAGGCAAGACATGTATCACAAGGCTTGGAAACAAATTTGTGAAATTAGTAGAACTGAATTCCACAGGGCCTATGAACCGCTTGATATTCAATTGGAGGAAAGGATGGCTGGTTTTGGATTGGCTAAGTTGACTATTGATAATAACATTCATGTATCAACTCGTGTCATGGGAACATTCGGGTACTTAGCTCCTGAATATACATCAAGTGGAAAATTAATAGAGAAGTCTGATGTATTCTCGTTTGGAGTGAAGTGGATGCAGACTCCAACATGCTCAAAAGTGATGGAGGGAGCAATTAAGTATGGGGTTAACAGCGGTGCCGAGGACGGGTGTCGTCGTGAAGGGGAAAGTGGAAGCCGACCATGA 408 0.424 MKSFSPSYDALRNSRQDMYHKAWKQICEISRTEFHRAYEPLDIQLEERMAGFGLAKLTIDNNIHVSTRVMGTFGYLAPEYTSSGKLIEKSDVFSFGVKWMQTPTCSKVMEGAIKYGVNSGAEDGCRREGESGSRP 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212984g00003 135 SUPERFAMILY Protein kinase-like (PK-like) 46 104 IPR011009 -
Stsc212984g00003 135 ProSiteProfiles Protein kinase domain profile. 1 135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc212984g00003 135 Gene3D Transferase(Phosphotransferase) domain 1 14 117 - -
Stsc212984g00003 135 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 41 103 - -
Stsc212984g00003 135 Pfam Protein tyrosine and serine/threonine kinase 48 104 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212984g00003 Stsc-Chr212984 11408 13550 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212984g00003 34 122 Trihelix Transcription Factor Family AT1G68690 49.462 8.39e-22 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Stsc212984g00003 PK_Tyr_Ser-Thr 2.4e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212984g00003 - - cit:102621597 95.9005