Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212955g00001 ATGATCCCAAAATTATTGCCATCTTCCAAGAAGAAGCTTGTAGGCATCGATTCAAGAGTGGAACAAGTGATTAATCACATTGGTATTGGGTTGGACGATGTTCGTTTTATAGGCATATGTGGATTGGGTGGCATAGGTAAGACAACTCTCGCTAGAATAGTATATGAATCCGTCCAAAGTGAATTTAAAGTAGCTTGTTTTTTTGCCGATGTAAGAGAGAGATGTGAGAAAAATGGTATTGTTCAAGCACAAAAAGACCTTCTTGTCCATATCAATGGAAGCTCGAGTGAAATTGATTACAAGTATGATGGGAGGAGAATAATTCAGGCTTCTTTGTGTCATAAGAAGGTTCTTCTTGTTCTTGATGATGTAAATAAAGAAGAACAGTTGAAGAATTTGGCTGAAGAGCAAGATTGGTTTGGTCCTGGTAGCAGAATAATTATTACAACTAGAGACATGCGACTGCTAAGGATACAAGATGCACGTGAAATTTACAATGTTGAAGGGTTGGCAGAAAATGAAGCCTTTGATCTCTTTTGTTTGAAGGCTTTTAAGCAACGAAAGCCTGAAAAGGAGTATTTAGATTTATCCAAACAGGTGGTTAAATATTGTGCTGGTCTTCCATTGGCACTTGAAGTATTGGGTTCCCATTTTTATGGTAGATCTATTAAAGAATGGCATAGTGCTCTTGAAAAATTAAAGAGCTTTCCACATGTCGACATTTTTGAGACGTTGAAAATAAGTTATGATGGTTTAGACTCCATGGACAAGGATATTTTTTTAGACATTGCTTACTTTTTCAAAGGAAATTTTAAAGAAAATGTCATAAATATATTAAAAAGGTGTGGTTATCATGTTGAAATTGGCATCGCTACTTTGGTCGATAGATCTTTACTCTCTATAAAAAACAAAGGTTCATGGGAGGTGCTCGAGATGCATGATTTGCTTGAAGAAATGGGCAGACATATTGTAATTCAAGAATCTCCGAATGATCCTAGCAAGCGTAGCAGGTTGCGGTACTATGAGGACATCGATCTTGTTCTCACTCAAAACAAGGGAACTGAAGCAACTCATAGCATCATTTTCCCTAGAGTGATTCATAAAATGCATTCTGATGAGCGTTGGAGAGGTTTAACCTTCTCAAATATATCTCAGTTGAAGATCCTCATTTTAGATGGTTTAAATGTTCCCGTTGTTAGCTATATTCCTTCTTCATTAAGAGTTTTTCATTGGGCAAGTTGTCCAATGGAAACTCTACCCTTTATAGATCAATACTATGAACTTGTTGAAATTGATCTGCAAAATAGCTCCAGCATCGTACAAGTATGGCATGGACAAAAGTTTCTGGAAAAGCTCAAGTACTTAAGGCTGCACAATTGCTCTCGGCTGAAACAAATTCCAGATTTTTCTAAAGCACCCAATCTTGAAATACTTTACGTTCAAGGTTGTGGTGAACTGGAATATTTTCCCTCACATCTCACACGCCACGAGGGCCTAGTTGAACTGAAGTTAATTAATTGCCCAAGTCTTGAAACTCTTGGGAGTAAATTGGAGATGAGTTCCCTCAAGAAACTAGATATTGGCGGCTGCATAAGTATGAGGAAACTTCCAGAATTTGGAAAATGCATGAAAAATTTATCAATTCTTTCTCTGTGGGGAATAGCCATAGAAGAACTACCCATGACGGTTGGATGTCTAGTTGGACTATCTAATTTGAATATATATAATTGCAGCAAACTTCGTTGCCTTCCCTCATCAATAGGTCGTTTGGTTAGCCTAAACCATTTACACTTACGAAAATGCAAAAGTCTTACTTGCCTACCAGACAGCATTCAAGAGTTAAAATCCCTCATGGTTTTGAATATTTGTAATTGCCCAAGTCTCCTTAAATCTTGGCATCCCCTCTCTGGTTTGACCTCATTGGTTACTCTGAAATTAGCGGCATGTTTTCTCACATCTCAAGAGTCATCGTCTTACAATCTTGGCCACTTAGCGTCTTTGACGGATTTGGATTTATCAGAAAACAATTTTGTAAGGATTCCAATAAATATGCATAAACTCTCCAAGCTTAGATGTCTAAATCTTGAAAACTGCCTTCATCTTAAGGTGTTACCAGAGCTTCCATCAAGTATAAGAGAGTTAAATGCACGAAATTGTATATCACTGGATTTATGGAATTCGAATGTTATATCAAAGGCGTGTTGTGGCTTTGTAGAATCAGCTAACCATGATCCTAATGACTTGTTGCAAATGTGGCTCACAGAAAAGAAAATAAGGTTGGCCACGGAATTTCCATCGTGGTTTGTCCATCAGGAACAGGGTAATGGAGTATCAGTCACATTGCCACATAATGAAACCATGTCACTTGCTCTCTGTTTCCAATTCTGCCCAATGAGAGGGACTGAGAATTTTGTTTTTAATCCTTTGGTGATTTGCAACGGTAAAGAGTTCATCAAAAAAAGTTTAAGTACAGAGATGCGTGAAATCAAATATACTCAGTATTTCATCATGTGCTTGACTAGTGACTATTTTGTTGACCAATTTTGCCAAGACTATCGCTACAAAATGGTACTTCCAGATTATGTTCCAATGAAAGTACAGACTTGTGGGGCTCGTTGGGTGTGCAAGCAAGACATTCAAGATTTTCAGAAACAAAAAGCCGAACTGAAACTTGAAAATGAAAATTAA 2688 0.3743 MIPKLLPSSKKKLVGIDSRVEQVINHIGIGLDDVRFIGICGLGGIGKTTLARIVYESVQSEFKVACFFADVRERCEKNGIVQAQKDLLVHINGSSSEIDYKYDGRRIIQASLCHKKVLLVLDDVNKEEQLKNLAEEQDWFGPGSRIIITTRDMRLLRIQDAREIYNVEGLAENEAFDLFCLKAFKQRKPEKEYLDLSKQVVKYCAGLPLALEVLGSHFYGRSIKEWHSALEKLKSFPHVDIFETLKISYDGLDSMDKDIFLDIAYFFKGNFKENVINILKRCGYHVEIGIATLVDRSLLSIKNKGSWEVLEMHDLLEEMGRHIVIQESPNDPSKRSRLRYYEDIDLVLTQNKGTEATHSIIFPRVIHKMHSDERWRGLTFSNISQLKILILDGLNVPVVSYIPSSLRVFHWASCPMETLPFIDQYYELVEIDLQNSSSIVQVWHGQKFLEKLKYLRLHNCSRLKQIPDFSKAPNLEILYVQGCGELEYFPSHLTRHEGLVELKLINCPSLETLGSKLEMSSLKKLDIGGCISMRKLPEFGKCMKNLSILSLWGIAIEELPMTVGCLVGLSNLNIYNCSKLRCLPSSIGRLVSLNHLHLRKCKSLTCLPDSIQELKSLMVLNICNCPSLLKSWHPLSGLTSLVTLKLAACFLTSQESSSYNLGHLASLTDLDLSENNFVRIPINMHKLSKLRCLNLENCLHLKVLPELPSSIRELNARNCISLDLWNSNVISKACCGFVESANHDPNDLLQMWLTEKKIRLATEFPSWFVHQEQGNGVSVTLPHNETMSLALCFQFCPMRGTENFVFNPLVICNGKEFIKKSLSTEMREIKYTQYFIMCLTSDYFVDQFCQDYRYKMVLPDYVPMKVQTCGARWVCKQDIQDFQKQKAELKLENEN 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212955g00001 895 Gene3D - 1 165 IPR027417 -
Stsc212955g00001 895 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 609 IPR044974 GO:0006952
Stsc212955g00001 895 Gene3D - 169 253 IPR042197 -
Stsc212955g00001 895 Pfam NB-ARC domain 18 250 IPR002182 GO:0043531
Stsc212955g00001 895 Gene3D Ribonuclease Inhibitor 346 535 IPR032675 -
Stsc212955g00001 895 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 263 IPR027417 -
Stsc212955g00001 895 SUPERFAMILY L domain-like 312 738 - -
Stsc212955g00001 895 Coils Coil 879 895 - -
Stsc212955g00001 895 Gene3D Ribonuclease Inhibitor 536 784 IPR032675 -
Stsc212955g00001 895 PRINTS Disease resistance protein signature 204 218 - -
Stsc212955g00001 895 PRINTS Disease resistance protein signature 111 125 - -
Stsc212955g00001 895 PRINTS Disease resistance protein signature 36 51 - -
Stsc212955g00001 895 PRINTS Disease resistance protein signature 517 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212955g00001 Stsc-Chr212955 1134 5984 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212955g00001 5 622 WRKY Transcription Factor Family AT4G12020 30.818 2.48e-73 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212955g00001 - - ahf:112769348 1141.72