Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc212927g00003 | ATGGATATCAACAAACTACTAGTACAGGGAGCTAATAATGAAGAGTTGCTGTTTGAGGCTCAGACCCATTTGCACTACTACACTTTTCATTTCCTTGGTTCTTTGTGCCTCAAAGCTGCTATCCAATTGGGAATACCAGACATAATCCATAACCATGGCAACCCTATTACTATACCTGAGCTAGCATTGGCACTTAACATTGACTCTAACAAATCTTCTTATTTATACAGGCTCATGCGCTTCTTGGTTCATGCTGGATTCTTTGTTACAACCAAGATTGATGGTGGAAAAGAAGAAGAAGGAATAATGGGGTATGATCTTACACCCTCCTCAAGGCTCCTCCTCAAGAACAATGTCCCAACACTCTCTCCTTTTGTTCAAGCAATGTTAAATCATTCTATACTTCACTCTCCTGAGTTCTTAGCAGAATGGTTCCACAGCAGCAGTGACCTCACTCCATTCCACACTGCACATGGCATGAGTTTTTGGGACTATACGAGCCAAAACAAAGAGTTTAATGGCCTCTTCAGTGAAGCAATGATTAGTGATTCAGGGATGGCGAAGTTGGTTATCAAAGATTTCAAGTCTGTTTTTGAAGGACTGAAATCCATGGTTGATGTTGGAGGAGGCAAAGGAGGTATGGCTAGGTTGATATCTGAGTCAGTGCCTGGCTTGCAATGCACGGTTCTTGATCTTCCACATGTGGTTCAAAACTTGCAAGATACCAACAACCTGAAATTTGTTGGTGGTGACATGTTTGAAGCTATTCCTCCTGCTGATGCCATTCTTCTTAAGCTAGTCTTGCATTGTCTGAATGATGAAGACTGCGGCAAGGTACTGAAGAAGTGCAGAGAAGCCATTTCAAGCAAGGGCAAGGAAGGAAAAGTGATAATCATAGACATAGTGATCAATGAGAAGGATGATAAGCATGAATTGGCAGAAGCGAAGCTATATTTTGACATGTTAATGATGACTTTGCTCCCTGGAAGGGAGAGGGAAGAGAAAGAATGGGAGAAACTCTTCTTGGAAGCTGGATTCAGTCACTATAAGATTACACCCATATTTGGGACGAGATCACTCATTCAAGTTTATCCTTGA | 1098 | 0.4171 | MDINKLLVQGANNEELLFEAQTHLHYYTFHFLGSLCLKAAIQLGIPDIIHNHGNPITIPELALALNIDSNKSSYLYRLMRFLVHAGFFVTTKIDGGKEEEGIMGYDLTPSSRLLLKNNVPTLSPFVQAMLNHSILHSPEFLAEWFHSSSDLTPFHTAHGMSFWDYTSQNKEFNGLFSEAMISDSGMAKLVIKDFKSVFEGLKSMVDVGGGKGGMARLISESVPGLQCTVLDLPHVVQNLQDTNNLKFVGGDMFEAIPPADAILLKLVLHCLNDEDCGKVLKKCREAISSKGKEGKVIIIDIVINEKDDKHELAEAKLYFDMLMMTLLPGREREEKEWEKLFLEAGFSHYKITPIFGTRSLIQVYP | 365 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc212927g00003 | 365 | Gene3D | Vaccinia Virus protein VP39 | 116 | 365 | IPR029063 | - | |
Stsc212927g00003 | 365 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 25 | 365 | IPR016461 | GO:0008168 | |
Stsc212927g00003 | 365 | PIRSF | O-mtase | 3 | 365 | IPR016461 | GO:0008168 | |
Stsc212927g00003 | 365 | CDD | AdoMet_MTases | 205 | 303 | - | - | |
Stsc212927g00003 | 365 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 122 | 363 | IPR029063 | - | |
Stsc212927g00003 | 365 | Gene3D | - | 8 | 114 | IPR036388 | - | |
Stsc212927g00003 | 365 | FunFam | O-methyltransferase ZRP4 | 116 | 365 | - | - | |
Stsc212927g00003 | 365 | Pfam | O-methyltransferase domain | 141 | 347 | IPR001077 | GO:0008171 | |
Stsc212927g00003 | 365 | FunFam | Coniferyl alcohol 9-O-methyltransferase | 8 | 114 | - | - | |
Stsc212927g00003 | 365 | SUPERFAMILY | "Winged helix" DNA-binding domain | 14 | 118 | IPR036390 | - | |
Stsc212927g00003 | 365 | PANTHER | O-METHYLTRANSFERASE | 18 | 350 | IPR016461 | GO:0008168 | |
Stsc212927g00003 | 365 | Pfam | Dimerisation domain | 36 | 83 | IPR012967 | GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc212927g00003 | Stsc-Chr212927 | 4508 | 6390 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc212927g00003 | 8 | 351 | Monolignol Biosynthesis Gene Families | AT5G54160 | 30.312 | 9.35e-43 | 150 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc212927g00003 | K22588 | - | qsa:O6P43_012698 | 471.47 |