Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212925g00001 ATGGTGGGTACATCAAGCTCAGACGAAGGTGCAGGGCTTCTAGAGCCTCATGATCCCGATGTACTTGAAATTGATCCTACCGGTCGCTACATTAAGGCATTTGATGAAGTCAATGGACTCGAAGTTGCGTGGAGTCAGGTTCGGATTGATGAAGTACTACAGTCACCAGATGACTTAGAGAGGCTGTACTCGGAGGTGCATCTCTTGAGGTCATTGAAACACAATAACATAGTAAGGTTCTACAATTCTTGGATTGATGACAAACACAGGACGGTTAACATGATTACAGAGCTTTTCACCTCAGGGAGCCTCAGACAGTATTGTAAGAAACACAAGAGGATCAACATTAAGGCTATTAAGGGATGGGCAAGACAAATTTTAGTGGGTTTAAACTACCTCCATAATCACAGCCCACCGATTATACATAGGGACCTGAAATGTGATAATATATTTATAAATGGTCACCAAGGTGAAGTTAAAATTGGAGATCTGGGATTAGCGACTCTCTTGAAAGAGAGTAATGCTAAGAGCGTAATTGGAACTCCGGAGTTTATGGCACCTGAACTTTATGATGAAAATTACAATGAACTAGTTGACATATATTCTTTCGGGATGTGCATGCTTGAGTTGGTGACTTCTGAGTATCCTTACAGTGAATGTAGAAACTCAGCTCAGATATTCAAGAAAGTTTCAACTGGTATAAAGCCCTTTGGACTTTCTAAAGTCAAAGATCCAGATGTAAAATCATTCATTGAGAAATGTCTTGTCCCTGCATCTCAAAGATTGTCAGCTAAGGAGCTTCTTATGGACCCTTTTCTCCAAGCCAATGGTTCAGTGACAAATCGTCCTCTTCCATTACCAGATATTGTTCTTCCCAAATTCGGAGCATTTGAAAATCGTTGTCTGATGTCAGAAGGTCCTGCTAGTGCACGCATAGGTTCCATTCCAATGGATTCTGGTGGCACCAGTGAGCTACCTGTGACCGCCGTATTTTATAATAATAATGCTGATGGTGGATCACCTTCTCCATGTGTTGAGATACGAAGGCAGAAGGGAAGTGATATTTTCTTTCTAAGAGGCGAAGAAAATGATGAGAACTCAGTGTCATTAGTTCTCCGGATAGCCGATCAGAGTGGGCGGGCAAGAAATATCCATTTCATTTTTTACCTCAGCAGTGATACAGCCATCTCAGTTTCAACAGAAATGGTTGAGCAACTTGATCTTGCTCAGCAGAATGTTAAATTCATAGCTGAGATAATAGACTTGCTGTTGATGACTTTGGTTTCTGATTGGAAACCTTGTGTACCCGTTGATCATTTGGCTTCTCCAAGTGTTAGATGGACTCATTCGAGCCAACAGAACAGCTCTGGGTTTGCAATGTTCAAAAATAGTTCAGAAGGTGCTAGCCAAACTGCACCTAAAAATGCAGGTACAACATCGATTTCAAGGTCAACACAAAGAGGAAACCATGATAGTACAACTCTTCACAAGGCATGGTCTCATGCAAGCTTTGGTTTTCACGATGCAATAACGGGAGATGATACGCGTTCAGAGATGTCGTATACTTCTACAACGTCCAACTTACCGGCCAAGAATATGTCGACGGTTTCATTGGCTTCATTAGTGTCTGCTCACTCAGAATTTGTTGACTTGGGTCTAACTAGGGCACATGGAGGTAGTCAATCCTCGTTTGATTACGAAACTGAGGTATCACATGACCTGGAAAGTGATGGTATGATGAACTCCTCCTCTATTCATCCCCGCATTGTTTCTTCCGTGTCTGAACCTCAGGATGAGTTAAAAATAGAGTTAGCAAAGGTTGAACAGCAATACCAAGATGCAATTAAAGATTTATCAGAAAGGAGATACCTTGCCATAGTGGAAACTAGAAAGAGGCTGGCACAAAAGATGCCATTATAA 1920 0.4161 MVGTSSSDEGAGLLEPHDPDVLEIDPTGRYIKAFDEVNGLEVAWSQVRIDEVLQSPDDLERLYSEVHLLRSLKHNNIVRFYNSWIDDKHRTVNMITELFTSGSLRQYCKKHKRINIKAIKGWARQILVGLNYLHNHSPPIIHRDLKCDNIFINGHQGEVKIGDLGLATLLKESNAKSVIGTPEFMAPELYDENYNELVDIYSFGMCMLELVTSEYPYSECRNSAQIFKKVSTGIKPFGLSKVKDPDVKSFIEKCLVPASQRLSAKELLMDPFLQANGSVTNRPLPLPDIVLPKFGAFENRCLMSEGPASARIGSIPMDSGGTSELPVTAVFYNNNADGGSPSPCVEIRRQKGSDIFFLRGEENDENSVSLVLRIADQSGRARNIHFIFYLSSDTAISVSTEMVEQLDLAQQNVKFIAEIIDLLLMTLVSDWKPCVPVDHLASPSVRWTHSSQQNSSGFAMFKNSSEGASQTAPKNAGTTSISRSTQRGNHDSTTLHKAWSHASFGFHDAITGDDTRSEMSYTSTTSNLPAKNMSTVSLASLVSAHSEFVDLGLTRAHGGSQSSFDYETEVSHDLESDGMMNSSSIHPRIVSSVSEPQDELKIELAKVEQQYQDAIKDLSERRYLAIVETRKRLAQKMPL 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212925g00001 639 MobiDBLite consensus disorder prediction 1 20 - -
Stsc212925g00001 639 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 25 622 - -
Stsc212925g00001 639 FunFam probable serine/threonine-protein kinase WNK9 99 278 - -
Stsc212925g00001 639 FunFam Probable serine/threonine-protein kinase WNK1 16 97 - -
Stsc212925g00001 639 Pfam Protein kinase domain 30 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc212925g00001 639 Gene3D Transferase(Phosphotransferase) domain 1 99 281 - -
Stsc212925g00001 639 Coils Coil 597 617 - -
Stsc212925g00001 639 ProSiteProfiles Protein kinase domain profile. 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc212925g00001 639 CDD STKc_WNK 32 273 - -
Stsc212925g00001 639 SUPERFAMILY Protein kinase-like (PK-like) 31 274 IPR011009 -
Stsc212925g00001 639 Gene3D - 366 460 - -
Stsc212925g00001 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Stsc212925g00001 639 MobiDBLite consensus disorder prediction 458 494 - -
Stsc212925g00001 639 Gene3D Phosphorylase Kinase; domain 1 17 97 - -
Stsc212925g00001 639 SMART serkin_6 21 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212925g00001 Stsc-Chr212925 9824 12704 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212925g00001 116 472 MAP Kinase Kinase Kinase AT1G49160 64.426 7.23e-163 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Stsc212925g00001 Pkinase 5.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212925g00001 K08867 - gmx:121175054 816.609