Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212882g00002 ATGGTAGGAACAGAAATGGAGGTAATAATAAGTTGGGTATTATGGATTATGATGATGAGTGGTGCCACGTTGTTGGCATTCTACTTTGTTGTGAAGACGGTGGGGAGAAGGGTGAACGAATGGTATTATGATTTCAAGTTAGGAGACAAGCGTCGATTCTTACCTCCCGGTGACATGGGTTGGCCTCTTATCGGAAAAACCTTGTTCTTTATCAAAGATTTGAGATCTGGATATACTCACCCTGATTCATTCATCAACAACCTTGTTTCCAAATATGGAAAATTGGATATGTACAAAACACACTTATTTATGAATCCTGGAGTATTTGTGTGCACACTGGAGGCAAGTAGAAAAGTATTGAGTGATGACAACAAATTTAAATTAGGTTATCCCGAAACCACTTTGACGATGGTACAGTCACCGTTGACCAATGTGTCCAGCGAAGAGCACAAGCGTTTCCGGCGACTGGTAATCGCCCCCATTCTGGGCTACAATTCTTTAGCCAAGTTTCTAAATCCAATCGAGAACATAGTGATTGAATCACTCGAAAGAATGATGAGCAGGAGCACAAAACAACCTATTATGCTGATCAATGAGACCATGAACCTCTCGTTAAGAGTCATTGTTCACATCTTCATTGGATCTTACCATCATCATGATACAATCAAACAAGTTGAACATTTGCTTGATGCTATTAATGATGCTTTGTTCTCTTTGCCAATTAATTTCCCCGGTTTTCCTTATTATAAAGCACTTAAGAATCGTAAGAAGGTGGAAGAAATACTTAAATCAATTGTGGAGGAAAGGAAGCTAATGATGAAAGATGGTAGTGATGAAGTGACAGAAAAGAAAGATCTTGTTGATATTCTTCTAGAAGTAGAGGATGTGAATGGTCGAAAATTGAAGGGTGAAGATATTGTTAACACGTTGATCGCGTTATTTTTGGCTGGTCATGTAAGTTCAGCAACGGCTTTAATGTGGTCTGTGATATATCTCACAAAGAACACCCTCGCCTTCAAGAAAGTCAAGGAAGAGCAGGAAGAGATTTTGAAATCAAGGCCACCTTCACAAAAGCATTTAAGCATTGAAGAAATTAAGAAAATGAATTATCTTATTAAGGTAATTAATGAAGTAATGCGCGTAACGGAATGGACAGTTTTTCTCTGCCGAGAAGCAACTACAGATGTGGATATCAATGGTTATATCATACCCAAAGGATGGAAAGTATTTATTTGGCAGAGATGTTGTCATCGGTCTTCTGAATATTTTCCAAATCCCGAAGACTTTAATCCTTTCAGATGGGAAAACGATGATTTTACAAAAGGAGGAGCCTTCTTTCCTTTTGGGGTTGGAACAAGGATGTGCCCTGGAAGAGATCTCCTCAAAATTGAAATGCTCATCTTTCTGCATCATTTCGTCCTTAATTATAAGTTAGTTAATAAAAAGTTTTCTATATTATCACTCTCTTCTTTTCGTTATTTTTTTTCCCCTATAAAATTCTCATAA 1506 0.3765 MVGTEMEVIISWVLWIMMMSGATLLAFYFVVKTVGRRVNEWYYDFKLGDKRRFLPPGDMGWPLIGKTLFFIKDLRSGYTHPDSFINNLVSKYGKLDMYKTHLFMNPGVFVCTLEASRKVLSDDNKFKLGYPETTLTMVQSPLTNVSSEEHKRFRRLVIAPILGYNSLAKFLNPIENIVIESLERMMSRSTKQPIMLINETMNLSLRVIVHIFIGSYHHHDTIKQVEHLLDAINDALFSLPINFPGFPYYKALKNRKKVEEILKSIVEERKLMMKDGSDEVTEKKDLVDILLEVEDVNGRKLKGEDIVNTLIALFLAGHVSSATALMWSVIYLTKNTLAFKKVKEEQEEILKSRPPSQKHLSIEEIKKMNYLIKVINEVMRVTEWTVFLCREATTDVDINGYIIPKGWKVFIWQRCCHRSSEYFPNPEDFNPFRWENDDFTKGGAFFPFGVGTRMCPGRDLLKIEMLIFLHHFVLNYKLVNKKFSILSLSSFRYFFSPIKFS 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212882g00002 501 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212882g00002 501 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212882g00002 501 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212882g00002 501 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212882g00002 501 PANTHER CYTOCHROME P450 26 52 481 - -
Stsc212882g00002 501 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212882g00002 501 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212882g00002 501 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212882g00002 501 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212882g00002 501 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212882g00002 501 Gene3D Cytochrome P450 48 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212882g00002 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Stsc212882g00002 501 Pfam Cytochrome P450 55 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212882g00002 501 SUPERFAMILY Cytochrome P450 51 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212882g00002 Stsc-Chr212882 4919 12205 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212882g00002 6 478 Cytochrome P450 AT1G05160 39.579 2.67e-126 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212882g00002 K04123 - adu:107492701 594.734