Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212882g00001 ATGGTAGGAACAGAAATGGAGGTAATAATAAGTTGGGTATTATGGATTATGATGATGAGTGGTGCCACGTTGTTGGCATTCTACTTTGTTGTGAAGACGGTGGGGAGAAGGGTGAACGAATGGTATTATGATTTCAAGTTAGGAGACAAGCGTCGATTCTTACCTCCCGGTGACATGGGTTGGCCTCTTATCGGAAAAACCTTGTTCTTTATCAAAGATTTGAGATCTGGATATACTCACCCTGATTCATTCATCAACAACCTTGTTTCCAAATATGGAAAATTGGATATGTACAAAACACACTTATTTATGAATCCTGGAGTATTTGTGTGCACACTGGAGGCAAGTAGAAAAGTATTGAGTGATGACAACAAATTTAAATTAGGTTATCCCGAAACCACTTTGACGATGGTACAGTCACCGTTGACCAATGTGTCCAGCGAAGAGCACAAGCGTTTCCGGCGACTGGTAATCGCCCCCATTCTGGGCTACAATTCTTTAGCCAAGTTTCTAAATCCAATCGAGAACATAGTGATTGAATCACTCGAAAGAATGATGAGCAGGAGCACAAAACAACCTATTATGCTGATCAATGAGACCATGAACCTCTCGTTAAGAGTCATTGTTCACATCTTCATTGGATCTTACCATCATCATGATACAATCAAACAAGTTGAACATTTGCTTGATGCTATTAATGATGCTTTGTTCTCTTTGCCAATTAATTTCCCCGGTTTTCCTTATTATAAAGCACTTAAGAATCGTAAGAAGGTGGAAGAAATACTTAAATCAATTGTGGAGGAAAGGAAGCTAATGATGAAAGATGGTAGTGATGAAGTGACAGAAAAGAAAGATCTTGTTGATATTCTTCTAGAAGTAGAGGATGTGAATGGTCGAAAATTGAAGGGTGAAGATATTGTTAACACGTTGATCGCGTTATTTTTGGCTGGTCATGTAAGTTCAGCAACGGCTTTAATGTGGTCTGTGATATATCTCACAAAGAACACCCTCGCCTTCAAGAAAGTCAAGGAAGAGCAGGAAGAGATTTTGAAATCAAGGCCACCTTCACAAAAGCATTTAAGCATTGAAGAAATTAAGAAAATGAATTATCTTATTAAGGTAATTAATGAAGTAATGCGCGTAACGGAATGGACAGTTTTTCTCTGCCGAGAAGCAACTACAGATGTGGATATCAATGGTTATATCATACCCAAAGGATGGAAAGTATTTATTTGGCAGAGATGTTGTCATCGGTCTTCTGAATATTTTCCAAATCCCGAAGACTTTAATCCTTTCAGATGGGAAAACGATGATTTTACAAAAGGAGGAGCCTTCTTTCCTTTTGGGGTTGGAACAAGGATGTGCCCTGGAAGAGATCTCCTCAAAATTGAAATGCTCATCTTTCTGCATCATTTCGTCCTTAATTATAAGTTTGAGCAAATAAATCCAGAATGTCCTCTCTCTTACATGCCAATGCCGGTGCCTAAAGATAACTGCCGTGGCAAGATAACAAAGGTCTCTATGGAATAA 1530 0.3869 MVGTEMEVIISWVLWIMMMSGATLLAFYFVVKTVGRRVNEWYYDFKLGDKRRFLPPGDMGWPLIGKTLFFIKDLRSGYTHPDSFINNLVSKYGKLDMYKTHLFMNPGVFVCTLEASRKVLSDDNKFKLGYPETTLTMVQSPLTNVSSEEHKRFRRLVIAPILGYNSLAKFLNPIENIVIESLERMMSRSTKQPIMLINETMNLSLRVIVHIFIGSYHHHDTIKQVEHLLDAINDALFSLPINFPGFPYYKALKNRKKVEEILKSIVEERKLMMKDGSDEVTEKKDLVDILLEVEDVNGRKLKGEDIVNTLIALFLAGHVSSATALMWSVIYLTKNTLAFKKVKEEQEEILKSRPPSQKHLSIEEIKKMNYLIKVINEVMRVTEWTVFLCREATTDVDINGYIIPKGWKVFIWQRCCHRSSEYFPNPEDFNPFRWENDDFTKGGAFFPFGVGTRMCPGRDLLKIEMLIFLHHFVLNYKFEQINPECPLSYMPMPVPKDNCRGKITKVSME 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212882g00001 509 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212882g00001 509 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212882g00001 509 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212882g00001 509 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212882g00001 509 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212882g00001 509 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212882g00001 509 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212882g00001 509 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212882g00001 509 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212882g00001 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Stsc212882g00001 509 PANTHER CYTOCHROME P450 26 52 495 - -
Stsc212882g00001 509 Pfam Cytochrome P450 55 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212882g00001 509 SUPERFAMILY Cytochrome P450 51 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212882g00001 509 Gene3D Cytochrome P450 48 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212882g00001 Stsc-Chr212882 4437 12205 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212882g00001 6 504 Cytochrome P450 AT1G05160 39.920 4.30e-138 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212882g00001 K04123 - adu:107492701 645.966