Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212842g00001 ATGCCAAGTGTGGCTGTAAAGCTCTACAGCGTCTTCTTCAAGTTCCTCTTGAAGCACCGTCTACAGAACCGGATTCAGGCACCGCCCGATAACTCCGACGCATTTGGAGTCACGACCCGACCCGAAGAATCCGTCGCCGCCGCCAATCCTTCTTTCACCGACGGCGTCGCCACCAAGGACATCCACATAGATCCCCTCACTTCCCTCTCTATCCGAATCTTCCTTCCCGAATCGGCACTAACCCCTCCCGAACCTCATTCCAACCCTAACTACAACAACGCTGCTCCCAAACCTAGGTCCGAACATGGATCTGTATCGGCTCGCGATTCGAACTCGCTCGCATCGCGCCGCAACAGCTATGGATCCTCCACTGTGATGCAAAGGCAGGAATCGATGCGGAGGAACCACGCCGGAAACGGCGTCGTTGAGGGTTTGAACTTGATGTCCAACGGCGTTTACCGGGGGTACTCGCCGGCGATGGACAATCGGCGGAAACTTCCGGTGATGCTGCAGTTCCACGGCGGCGGCTGGGTGAGCGGGAGTAATGATTCCGTTGCCAATGATATGTTCTGTCGGCGGATCGCGAAGCTCTGCGATGTGATCGTGGTGGCTGTTGGGTACAGGCTGGCACCGGAGAATCGGTACCCGGCGGCGTTTGAGGATGGCATGAAAGTGCTGAGTTGGTTGGCCAAGCAGGCGAATTTAGCAGAATGCAGTAAGTCGATGGGGGCTGGGAAGGTTGGTGGAGGTGGGGGAGGTGGTGTTGTCGGCGGCGTTGTTGGTGGGATTGAGTTCAAGAAAGCAGATTCTCATAGGCATATAGTTGATTCATTTGGAGCTTCAGTTGTTGAGCCGTGGTTGGCTGCTCATGGAGATCCATCAAGATGTATTCTTCTTGGCGCAAGTTGTGGTGCAAATATTGCAGACTATGTGGCTCGAAAAGCTGTGGAAGGCGGCAAACTTCTGGACCCAGTAAAGGTGGTAGCACAGGTCTTACTGTATCCATTTTTCGTTGGAAGTGTGCCCACTCGTTCCGAAATAAAATTAGCAAACTCGTACTTTTATGACAAACCTATGTGTATGCTTGCTTGGAAACTTTTCCTACCAGAGGAAGAATTTAGTTTGGACCATTCAGCCGCTAATCCCCTAATCCCGGGCCGAGGTCCTCCTTTAAAGCTAATGCCTCCAACATTGACGGTGGTGGCAGAACACGACTGGATGAGAGATCGTGCAATTGCTTACTCAGAGGAGCTCCGGAAGGTGAATGTTGATGCACCTGTGCTTGAATACAAGGATGCAGTGCATGAATTTGCAACACTTGATGTGCTTATTAAAAGCCCTCAGGCCCAAGTTTGTGCTGAGGACATCGCTATCTGGGTCAAGAAGTATATTTCACGTAGAGGTCACGAATTCTCTTATTGA 1422 0.519 MPSVAVKLYSVFFKFLLKHRLQNRIQAPPDNSDAFGVTTRPEESVAAANPSFTDGVATKDIHIDPLTSLSIRIFLPESALTPPEPHSNPNYNNAAPKPRSEHGSVSARDSNSLASRRNSYGSSTVMQRQESMRRNHAGNGVVEGLNLMSNGVYRGYSPAMDNRRKLPVMLQFHGGGWVSGSNDSVANDMFCRRIAKLCDVIVVAVGYRLAPENRYPAAFEDGMKVLSWLAKQANLAECSKSMGAGKVGGGGGGGVVGGVVGGIEFKKADSHRHIVDSFGASVVEPWLAAHGDPSRCILLGASCGANIADYVARKAVEGGKLLDPVKVVAQVLLYPFFVGSVPTRSEIKLANSYFYDKPMCMLAWKLFLPEEEFSLDHSAANPLIPGRGPPLKLMPPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATLDVLIKSPQAQVCAEDIAIWVKKYISRRGHEFSY 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212842g00001 473 Pfam alpha/beta hydrolase fold 169 438 IPR013094 GO:0016787
Stsc212842g00001 473 MobiDBLite consensus disorder prediction 80 135 - -
Stsc212842g00001 473 MobiDBLite consensus disorder prediction 84 134 - -
Stsc212842g00001 473 SUPERFAMILY alpha/beta-Hydrolases 154 464 IPR029058 -
Stsc212842g00001 473 Gene3D alpha/beta hydrolase 30 470 IPR029058 -
Stsc212842g00001 473 PANTHER ARYLACETAMIDE DEACETYLASE 40 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212842g00001 Stsc-Chr212842 930 6261 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212842g00001 1 473 Carbohydrate Esterase AT3G27320 72.327 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212842g00001 - - adu:107494848 872.078