Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212825g00003 ATGGCGGAGTGGTTGTTAAATCGGTGGACCGGTTCGGCCGCAGCTATAATGATCCAGTGGAGCTGCGGTGCATCGTACACCTTCAGCATCTACTCCCCTGTGCTCAAGTCCTCGCAAGGCTACGATCAATCCACGCTTGATACCGTTTCGGTGTTTAAGGACATCGGCGCCAATTTCGGCATCCTCTCCGGGCTTCTCTACACTGCCGTTACTCCCTACCGGAGTGGCGGTGAGGTGGGCTTGGAGGGGAAGTCGAGGTGGGCCTCATTGGGTGGGCCATGGGTGGTGCTGGCGGCTGGGGCGGTCCAGCTTTTCGTGGGTTTCTTGTTCCTGTGGGCCGCTGTTGTTGGGCTGATTGGGACGCCGCCGGTTTGGGTAATGTGCTTCTTTGCGTGGCTTGCAGCTAACGGTCAGGCGTTCTTGAATACTACGACTGTTGTGACTGGCTTGCGGAATTTCCCTGAATATAGTGGTACCATTGTCGGTATCATGAAGGGCTTCCTTGGACTCAGTGGAGCAATCTTAATTCAACTGTATCACACATTTTGTGATGGCGACCCTGCCTCATACCTTCTGATGCTTGCTTGTTTACCTTCTTTCATTTGCTTACTGCTTATGTTTTTGGTGAGGATCTATGAAGTGCGTGACAACAATTACAAGAAGCATTTGAATGGCTTCTCTGTCGTCACTGTGATTATTGTTGCCTATCTCATGTTCATAATCATTTTACAAAACTTCATCAGCTTATCAACTTGGGCGCGCATGCTCACATTTGTAATGCTAACGGTTCTACTGGCACTCCCCTACGGTGTTGCCATTAAAGCTCAATGGGAAGAGTCACGGAACTTTGCACAAACCTTCTCGTTCGAGAGGGCCCCTTCAACAGACAACCAAAAGCTAATCACTTCGTCTAGTTATTTTCCGTCAGTGGATCAATTGGAATACCATGAGCTGCCTAGTGATGCAGGGCAGGTACCATTGAATTTAGATGACATGTTGCCCCAAGAACAAGAAATGAACCTCCTGCAAGCTATGTGCACCATTGATTTTTGGATGTTGTTTGTAACCATGATATCAGGGTTGGGATCAGGGTTGGCAATGATAAATAACATGAGCCAAATAGGCGAATCGCTTGGCTATAGTACAATACAGATTAATAATATGGTGTCCTTGTGGAGTATGTGGAACTTTATTGGCCGTTTTGGAGGTGGCTATGTGTCTGATTATATGATGCACCGAAAAGGTTGGCCAAGGCCATTGTTGATGGCAGCAACTCTGGGGTCGATGATTTTCGGCCATGTCATTATAGCTGTTGGTTTCCCTGGAAACCTGTATTTGGGTCCAGTCTTGGTGGGAATCTGCTATGGTGCACATTGGGCCTTGATGCCTACAATCACTTCAGAGATTTTTGGTGTAAGGCATATGGGTACCATCTTCAACACTATTGCTGCTGCAAGTCCACTTGGATCTTATTTACTTTCTGTGAAAGTTGTTGGATATATTTATGACAAGGAAGCTGATAAAGAAGATAATTCATGCTTTGGAATACATTGCTTCATGTCATCGTTTTTTATCCTGGCAGCTGTATCTTTTATGGCATTTTTGGCTGGTCTTGCATTATACTTTCGGACACGAAAGTTCTATAAGCTAGTTGTGCTCAGAAGATTAAAACATTCTGTGTGA 1683 0.4617 MAEWLLNRWTGSAAAIMIQWSCGASYTFSIYSPVLKSSQGYDQSTLDTVSVFKDIGANFGILSGLLYTAVTPYRSGGEVGLEGKSRWASLGGPWVVLAAGAVQLFVGFLFLWAAVVGLIGTPPVWVMCFFAWLAANGQAFLNTTTVVTGLRNFPEYSGTIVGIMKGFLGLSGAILIQLYHTFCDGDPASYLLMLACLPSFICLLLMFLVRIYEVRDNNYKKHLNGFSVVTVIIVAYLMFIIILQNFISLSTWARMLTFVMLTVLLALPYGVAIKAQWEESRNFAQTFSFERAPSTDNQKLITSSSYFPSVDQLEYHELPSDAGQVPLNLDDMLPQEQEMNLLQAMCTIDFWMLFVTMISGLGSGLAMINNMSQIGESLGYSTIQINNMVSLWSMWNFIGRFGGGYVSDYMMHRKGWPRPLLMAATLGSMIFGHVIIAVGFPGNLYLGPVLVGICYGAHWALMPTITSEIFGVRHMGTIFNTIAAASPLGSYLLSVKVVGYIYDKEADKEDNSCFGIHCFMSSFFILAAVSFMAFLAGLALYFRTRKFYKLVVLRRLKHSV 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212825g00003 560 Pfam Nodulin-like 8 70 IPR010658 -
Stsc212825g00003 560 Pfam Nodulin-like 93 272 IPR010658 -
Stsc212825g00003 560 Gene3D MFS general substrate transporter like domains 349 558 IPR036259 -
Stsc212825g00003 560 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 549 - -
Stsc212825g00003 560 SUPERFAMILY MFS general substrate transporter 6 211 IPR036259 -
Stsc212825g00003 560 CDD MFS_Mch1p_like 8 533 - -
Stsc212825g00003 560 ProSiteProfiles Major facilitator superfamily (MFS) profile. 348 560 IPR020846 GO:0022857
Stsc212825g00003 560 Pfam Major Facilitator Superfamily 353 546 IPR011701 GO:0022857|GO:0055085
Stsc212825g00003 560 SUPERFAMILY MFS general substrate transporter 252 546 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212825g00003 Stsc-Chr212825 8827 13988 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212825g00003 3 558 Nodulin-like Gene Family AT1G74780 55.216 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212825g00003 - - adu:107491342 1053.51