Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212825g00002 ATGGATTCAGTGCAGCAGCGGATCACACTATACACTTTCTCAATCTACTCCCAAACCTTAAAGTCAACGCTGAACTACGATCAGTCAACTCTCAACACTGTCTCCGTTTGGAGGGACATAGGAGTCAACGTCGGCGTTATTTCGTGCCTTCTCTACGACTTCGCTGCCTGCCGAACACCCAACGGGCCTTGGCTGATCCACTTATTGGGCTCGGCCCAATGCTTCTTGGGCTACTTCCTTATTTGGGTTGTGGTTGCTGTCGCCATGGCGCCGGTTCTCGTGCCTGTCGTGTGCCTATTCATGTTCGTGGCAGCTCAGGCTCAGAGCTACTTCAACACTTCCAATATTGTCACTGGCGTTCACAACTTCCCTGACTATAGTGGAACCATTGTGGGCATTATGAAGCCAAAGTTTGGAGCGAAAGTGGCTGAAGAGAGAGCAAGGAATGAGAAGATCGCGAAGAAAAGCTTGGAGGCCAAATCTAGAGCCTATGCGTACCCACCAAAGGGGCCTATGCGTACGCACCAGTGGCCAGATTTGTACCTATAA 549 0.5064 MDSVQQRITLYTFSIYSQTLKSTLNYDQSTLNTVSVWRDIGVNVGVISCLLYDFAACRTPNGPWLIHLLGSAQCFLGYFLIWVVVAVAMAPVLVPVVCLFMFVAAQAQSYFNTSNIVTGVHNFPDYSGTIVGIMKPKFGAKVAEERARNEKIAKKSLEAKSRAYAYPPKGPMRTHQWPDLYL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212825g00002 182 Pfam Nodulin-like 11 136 IPR010658 -
Stsc212825g00002 182 Coils Coil 140 160 - -
Stsc212825g00002 182 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212825g00002 Stsc-Chr212825 6855 8085 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212825g00002 11 139 Nodulin-like Gene Family AT1G74780 53.237 2.88e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212825g00002 - - gmx:100814668 191.045