Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212812g00003 ATGTTTACCGTTGTCAGGGATGATGAAGCTAACCTAATAAGTGAAATTGTAAAAGCAATTTTGCCACAGAATATCAAGTACCACATGGATGGACGCAACATACCTTTTATTTGTAACAGAAACTATACCCACCTTGAATCTCTCTTGATGAGACGCAAGTTGGAGGAGGTTCTTGTGATTGGGATTTGGGGTATGGGCGGTATTGGTAAGTCATCCATTGCTCAGACTCTCTTCAATAAGTACTCTTTTAAATATGAAGGTTCTTGCTTCTTGACAAATTCAAGAGAATTAGAAAAGCCATGTCTCAATGACATATGCAACAGAATTCTTTCCCAATTATTAAATCAAGATCTTCATATTACCAATATTGGAGTACTAGACTCTCGCATTGTAAGTAAACTCAGGCACAAGAGGGTTTTCATTGTACTAGATGATGTGGTTGATTCGCCAATTGCAACTGATTTGGTTCCATTATTGCGTACTTGCCTATGTCCTGGTAGCATAGTCATCTTGACAACAAGGGACAGGAGTGTGCTCACAAGTGGAGGAGTTGATGATGAACAAAATCATGAAATCAAGAAAATGAGTAATGGAGACTCCCATAAACTTTTTAGCCACTATGCCTTTTCTGATTCACATCGCAAAGAAGAGTATCATAAGCTAACAGCTAGAGTCATATATTATGCTTCTGGCATTCCGTTGGCTTTGAAAATTTTGGGATCATTTCTTCAAGTGTAA 738 0.3794 MFTVVRDDEANLISEIVKAILPQNIKYHMDGRNIPFICNRNYTHLESLLMRRKLEEVLVIGIWGMGGIGKSSIAQTLFNKYSFKYEGSCFLTNSRELEKPCLNDICNRILSQLLNQDLHITNIGVLDSRIVSKLRHKRVFIVLDDVVDSPIATDLVPLLRTCLCPGSIVILTTRDRSVLTSGGVDDEQNHEIKKMSNGDSHKLFSHYAFSDSHRKEEYHKLTARVIYYASGIPLALKILGSFLQV 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212812g00003 245 PRINTS Disease resistance protein signature 133 147 - -
Stsc212812g00003 245 PRINTS Disease resistance protein signature 59 74 - -
Stsc212812g00003 245 PRINTS Disease resistance protein signature 229 243 - -
Stsc212812g00003 245 Gene3D - 6 184 IPR027417 -
Stsc212812g00003 245 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 244 IPR027417 -
Stsc212812g00003 245 Pfam NB-ARC domain 47 244 IPR002182 GO:0043531
Stsc212812g00003 245 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 244 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212812g00003 Stsc-Chr212812 7925 8662 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212812g00003 44 240 WRKY Transcription Factor Family AT5G45050 28.856 3.64e-21 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212812g00003 - - aip:107614881 356.295