Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212812g00002 ATGCCAAATTTAAGGCTACTTGCTATACACGATAAGATCATGCATCCTCAATGGAGCGAAACTGATAATTTGATATTGCTTCCAAAGAATTTTAAACTTCCTAATAAATTGAGGTATGTTTATTGGAGAAATATCCCCTCAAGCTCTCTATCACTTACTTGTTGGCCACAAAAGCTTGTTAAACTTTACATACGACATAGCAATATCGAAAAACTTTGGGATAGAACACAGAATCTGCCTAGTTTGGAGGGTATTGATCTCACTGCCTGCAGTCACTTGATAGAGTGCCCAAATTTAGATGGTTCCCCAAATCTCAAATATATAAGACTTCGTAACTGTAAAAACTTACCAGATGTTCATCCATCTGTTTTCTCTCTCCCCAAGATACAAAAACTAGACGTGAGAGACTGTAAGGCGCTGAAGAGGCTTTGCAGTGATTATTGTTCACCCTCACTTCGACAGTTGGAGGCCATGGGTTGCTCCAATTTGGAAGAATTCTCAGTCCCAATAGTGGCTCATCGTTCCAAAATCACTTTATCATCGACAGCATTGAATGAAGTGCCAACCAATATTCTGCATCTCCAAAATGTTGGCTTTTTCAGTTTTAACATGAGTTATTCCCTGGAGAAGCTTCCTAGTAACTTTGTCACTTCAATTATGCTCACGGACCCTGTGAAACGTGAAGATGATACATGCATCATGTTAAGCAGAATATTGCCTACCCCTGCTTTCTTGTCTCTCAACCGTTTATGCTTATTCAGATGTAAGAGCTTGTCTAAACTACCCGACAACATTGATGTCTTACAATCCTTACAAGCATTAATGGTAACACAGTGTCCTATTATAAGTTTGCCAGAAAAGATTAAGAATCTCCGGCAGCTGATATTACTTGAAATTTTTGGATGTGAAATTCTTCAATACGTACCTCCACTTCCTTCATCTATTGTAATGTTCTGCACAATGGATTGCAAATCTTTGGAGACAATCTCAAGTTTAACCTGCAAACTACCACTCAGAAAACACGCAGTGGTGTTTGGATTCTATAACACCATGAATCTGGATAAACATGCATATGAAGCTGTTTTGAAAGACCTAAAATTCAGGATAGAACTTGGGGCAGAGGATGTAAATTCTAATGATGAAATAGATGGTGGTGTATGTTACTTTATACCATATAAAAGTAACATGCCTAACGATTGTTTCCCTCAGTATTACTCCAAAAAAGCTTCTGTGGTCATTGTTGAAGCTCCTCCAGATCACTGGATTTCTTCTGGTCTTGTTTTCTACTTGCATTTTTCTCAATACCAATCTTGCGTCCTTGACAACATGATATTTGGATGTGAATGCTACTTGCAGAAAAGTTCCAATGAATGGGAGCGTATAGCATCTTCCGATCTCGAATGGTTCGGTGAGAGTATATACCCCGAGAACTTAACATTCAAAATGAAGTCAGATCATATGGCATTATGGTATGATGCAGAGTGTTGCAACACCATAATGAAGGCAATCAAAGAGGGAGAGAGTGACACCACTTGCAATCCTATTCTTAAATTTGAGTTCTATGCTCAACTTGAAGACAATAATGTGGAAGTAGTGACCAAGGGGTGTGGAATTCGGTGGATGCACGTGGATTTTGTCAAAGACAAAGGAAGGAGCAGTCAAGCTGAAACGGGTGTCGTTAAGAGATTACAGGTAGGGCGCAGGTTCTGGTTCGCATGCCGTGATGGAGAGCCGAAGGGAGCAGGAGCAGTTATCAGGAGTTATGAACGAGAAATGATGGCCTCCAAGGAAGAGACTCCATCTAATGTAGCTAACATTGCCCTTTTTGATGTAATGGGCTCAGCCGCTTTAACTTTTTTTCAAAGGAAGTCCAATCCAAACAAGTACTATATCATGTGA 1899 0.3976 MPNLRLLAIHDKIMHPQWSETDNLILLPKNFKLPNKLRYVYWRNIPSSSLSLTCWPQKLVKLYIRHSNIEKLWDRTQNLPSLEGIDLTACSHLIECPNLDGSPNLKYIRLRNCKNLPDVHPSVFSLPKIQKLDVRDCKALKRLCSDYCSPSLRQLEAMGCSNLEEFSVPIVAHRSKITLSSTALNEVPTNILHLQNVGFFSFNMSYSLEKLPSNFVTSIMLTDPVKREDDTCIMLSRILPTPAFLSLNRLCLFRCKSLSKLPDNIDVLQSLQALMVTQCPIISLPEKIKNLRQLILLEIFGCEILQYVPPLPSSIVMFCTMDCKSLETISSLTCKLPLRKHAVVFGFYNTMNLDKHAYEAVLKDLKFRIELGAEDVNSNDEIDGGVCYFIPYKSNMPNDCFPQYYSKKASVVIVEAPPDHWISSGLVFYLHFSQYQSCVLDNMIFGCECYLQKSSNEWERIASSDLEWFGESIYPENLTFKMKSDHMALWYDAECCNTIMKAIKEGESDTTCNPILKFEFYAQLEDNNVEVVTKGCGIRWMHVDFVKDKGRSSQAETGVVKRLQVGRRFWFACRDGEPKGAGAVIRSYEREMMASKEETPSNVANIALFDVMGSAALTFFQRKSNPNKYYIM 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212812g00002 632 Gene3D Ribonuclease Inhibitor 174 355 IPR032675 -
Stsc212812g00002 632 Gene3D Ribonuclease Inhibitor 1 173 IPR032675 -
Stsc212812g00002 632 Pfam Leucine Rich Repeat 58 77 IPR011713 -
Stsc212812g00002 632 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 168 IPR044974 GO:0006952
Stsc212812g00002 632 SUPERFAMILY L domain-like 23 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212812g00002 Stsc-Chr212812 3979 7341 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212812g00002 1 294 WRKY Transcription Factor Family AT4G12020 27.063 7.44e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212812g00002 - - aip:107624696 575.089