Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212808g00001 ATGGAAACGTGGTTCTTTCTGGTGGCTTCAGCATGCGTCTGTCTTCTCATCAGAGCAATAATAATTAACCTTGCAACTACCACTCACGGCCCACGTCTTCCCCCGGGCCCACCACACATTCCTATTGTAACAAGCATCTCCTGGCTTGCTAAATCATTCTCCCAGATTGAGCCCATCCTCGTGGGCCTACGGGCCAAGTACGGGCCCATCATCACACTCCGCATTACTGGCCGTCCTGCCATATTCGTGGCGGACCGATCCCTCGCTCACCAGGCACTCGTCCAGAAGGGCGCCGTGTTCTCCGACCGGCCACCTGCCCTCGCCGTCTCCCGCATCATTACCAAAAACCAGCACAACATCAACTCCGCACACTACGGCTCCACGTGGCGCACCCTCCGTCGCAACCTCACCAGCGAGATGCTCCACCCTAACCGCGTCAAATCGTTCTCCTCAGTCCGCCGCTGGGTCCTCGACGTCCTCGTCAACCGCCTCAAGTCCGATTCCGAAACCAGAGACTCCCTCAGAGTCATCGATCATTTCCACTACGCCATGTTCTGCTTACTCGTCTTCATGTGCTTCGGCGAAAAGTTGGACGAAAAGCAAGTCAAGGACGTGGAGCGTGTTCAGCGAGCGCTGCTTGTTTCGGTTAGTGGATTCAACATCCTCAATTTCTGGCCATCGATTACTCGGATTCTCTTACGGAAACGGTGGCAGGAGCTCTTCAGGCTTAAGAAGGAGCAGAGCGATGTGTTGGTTCCGCTAATTAGAGCTAGAAAGTCTGCAAAGGAACACCGTGGTAGCGGTGGCGGTGATGTTGTTTCGTATGTGGATACTCTGTTGGATTTGGAGTTACCGGAGGAGAACCGGAAATTGGACGAAGAAGAATTAGTGACGGTGTGTTCGGAGTTCTTGAGTGCCGGCACCGACACCACGGCCACTGCCCTACAGTGGATTATAGCCAATGTGGTGAAGTACCCGCACATTCAGCAGAGACTGCTCGAGGAGATCAGGGAGGTGAAGGGTGATGGTGACGGTGAGAGTATAGAGGAGGTGGAAGAAGAGGAGCTGCAGAGGATGCCGTACTTGAAGGCAGTGGTGTTGGAAGGGCTGCGGCGTCATCCTCCCGGGCACTTTGTGCTGCCGCATGCGGTGACAGAGGATGTTTCCTTGAATGGTTACTTGATACCGAAGAAAGGGACAGTGAATTTCATGGTGGCACAGATAGGTTGGGACCCTGAGGTTTGGGAGGATCCCATGGAGTTCAAGCCAGAGAGGTTCTTGGAGAATGAGAAGGAAGATGGTGTTCCTTTCGATATCACCGGGAATAAGGAGATTAAGATGATGCCATTCGGAGCAGGAAGGAGGATCTGCCCTGGTTTTAACCTGGCAATGCTCCATTTGGAGTACTTTGTAGCCAATTTGGTTTGGAATTTCAATTGGAAGGTGCCAGAAGGAGGAAGCGTGGATTTGTCAGAGAAGCAGGAGTTTACTATTGTCATGAAGAATCCATTGCATGCTCATATTACTCCCAGGATCTGA 1539 0.5263 METWFFLVASACVCLLIRAIIINLATTTHGPRLPPGPPHIPIVTSISWLAKSFSQIEPILVGLRAKYGPIITLRITGRPAIFVADRSLAHQALVQKGAVFSDRPPALAVSRIITKNQHNINSAHYGSTWRTLRRNLTSEMLHPNRVKSFSSVRRWVLDVLVNRLKSDSETRDSLRVIDHFHYAMFCLLVFMCFGEKLDEKQVKDVERVQRALLVSVSGFNILNFWPSITRILLRKRWQELFRLKKEQSDVLVPLIRARKSAKEHRGSGGGDVVSYVDTLLDLELPEENRKLDEEELVTVCSEFLSAGTDTTATALQWIIANVVKYPHIQQRLLEEIREVKGDGDGESIEEVEEEELQRMPYLKAVVLEGLRRHPPGHFVLPHAVTEDVSLNGYLIPKKGTVNFMVAQIGWDPEVWEDPMEFKPERFLENEKEDGVPFDITGNKEIKMMPFGAGRRICPGFNLAMLHLEYFVANLVWNFNWKVPEGGSVDLSEKQEFTIVMKNPLHAHITPRI 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212808g00001 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Stsc212808g00001 512 Pfam Cytochrome P450 34 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212808g00001 512 FunFam Cytochrome P450 family protein 27 512 - -
Stsc212808g00001 512 Gene3D Cytochrome P450 27 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212808g00001 512 SUPERFAMILY Cytochrome P450 34 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212808g00001 512 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212808g00001 512 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212808g00001 512 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212808g00001 512 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212808g00001 512 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212808g00001 512 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212808g00001 512 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212808g00001 512 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212808g00001 512 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212808g00001 512 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212808g00001 512 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212808g00001 512 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212808g00001 512 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212808g00001 512 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 15 504 - -
Stsc212808g00001 512 CDD CYP77_89 66 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212808g00001 Stsc-Chr212808 1813 3726 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212808g00001 1 511 Cytochrome P450 AT1G64940 57.803 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212808g00001 K24184 - gmx:100795683 720.309