Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212792g00001 ATGGAAGAAGAAGAAGATGAATACATGATATTGCAAATCATGGGTTGGTGTTTTGGGTTTCTAGTTTTGTATATCTTGGTAAAACTTGTGCATAGCATATGGTGGAAACCAAAAAGTATAGAGAAGCTTCTGAGGAAGGAAGGGATTAAAGGAACTTCTTACAAAGCTATTAAGGGAGACATTCCAGATATTAATAAGTGTGCCCGTGAAGCATCATCAAAGCCTATCACTCTCAACCACCAAATCGTCCCTCGAGTCATGCCTTTCTTTCACAAAATGGTTCAGCAATACGGAGAAGTTTCAGTAAGCTGGTTTGGAAGAAAACCAAGAGTGACAATAGTAGATGCTGAACTCATACGGTTGATTTTATCAAACAAGAGCGGTCAGATTATTAAGCCACCGCGCGAACCCTATGTTAAGCTTCTAACCAAGGGATTAACATCCCTTGAAGGTGAAAAATGGTCACAACGAAGAAAAGCGGTTACATCTGCATTCCTCCTCGACAAGTTGAAGGGGATGCTTCCTGCATTTTCGTATAGTTGTGGTACCATGATTGAGAGGTGGAAAAAGAAGGTGGAACAAAAGAATGGAGGATGGTGTGAGTTGGATGTGACTTGTGAATTGGACATTCTGACGGGTGATGTTATTTCTCGAGCAGGGTTTGGTAGCAATTACCAAGAAGGAAAGAAAATCTTCGACCTTCAAAAGGAGATGGCAATCTTGGTGCATGATGCTCTCACCAACATCTACATCCCTGGTTTCAGATTTATACCAACAAAGAAGAATAAGAGAAGGTACAAATTAGATGTTCAGATCAAAGGTATACTGATGGATATGATTCAGAAGAAAGAGCACGCAATGAAAGCTGATGGCAGTAGTAGTGATTTGTTAAGCATTCTATTAGAATGCAGAGAACAGCGTAATTCTCTGACAACCAACGACGTGATTGAGGATTGCAAGTTGTTCTACTTTGCTGGCCAAGTCACCACCAAGAACCTGCTTGCGTGGACTATGGTGGTTTTGTCTATGCACCCAAATTGGCAAGAAAAAGCAAGACATGAAGTGTTAGAGCTTTTTGGCACAAATGAAATACCTCCAGATTTTGAAGCCATAAACCGCCTAAAGATTGTGTCGATGATATTGTTGGAAGTTTTGCGACTATATCCGCCTGTACCAATAATTTCTCGGTACACAACGTGTGAAACAAAGGTAGGAGGCATGACGATTCCAGCAGGGGTGGAGCTTGTTTTACCAATGTTGCTTCTCCATCATGATGGAAGATACTGGGAGAATCCACAAGAGTTCAACCCAGAAAGGTTTACACAAGGGGTTTCAAAAGCAACTAAGGATCAAAATGCTTTCTTTCCATTCGGTTGGGGCCCAAGAATCTGCCCTGGCCAGAGCTTTGCACACTTGGAATCAAAGATGGCTCTGGCTATGATTCTTCAACATTTCTCATTCCATCTTTCGCCTTCTTATACTCATGCTCCATGTACCCGTCTTACCCTTTCGCCACAACATGGTGCTCCCATTATTATTCAACGCATTTCAATTTAG 1557 0.4162 MEEEEDEYMILQIMGWCFGFLVLYILVKLVHSIWWKPKSIEKLLRKEGIKGTSYKAIKGDIPDINKCAREASSKPITLNHQIVPRVMPFFHKMVQQYGEVSVSWFGRKPRVTIVDAELIRLILSNKSGQIIKPPREPYVKLLTKGLTSLEGEKWSQRRKAVTSAFLLDKLKGMLPAFSYSCGTMIERWKKKVEQKNGGWCELDVTCELDILTGDVISRAGFGSNYQEGKKIFDLQKEMAILVHDALTNIYIPGFRFIPTKKNKRRYKLDVQIKGILMDMIQKKEHAMKADGSSSDLLSILLECREQRNSLTTNDVIEDCKLFYFAGQVTTKNLLAWTMVVLSMHPNWQEKARHEVLELFGTNEIPPDFEAINRLKIVSMILLEVLRLYPPVPIISRYTTCETKVGGMTIPAGVELVLPMLLLHHDGRYWENPQEFNPERFTQGVSKATKDQNAFFPFGWGPRICPGQSFAHLESKMALAMILQHFSFHLSPSYTHAPCTRLTLSPQHGAPIIIQRISI 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212792g00001 518 PANTHER CYTOCHROME P450 FAMILY MEMBER 25 509 - -
Stsc212792g00001 518 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212792g00001 518 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212792g00001 518 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212792g00001 518 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212792g00001 518 SUPERFAMILY Cytochrome P450 81 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212792g00001 518 Pfam Cytochrome P450 89 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212792g00001 518 Gene3D Cytochrome P450 70 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212792g00001 518 PRINTS E-class P450 group I signature 94 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212792g00001 518 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212792g00001 518 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212792g00001 518 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212792g00001 518 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212792g00001 518 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212792g00001 518 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212792g00001 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212792g00001 Stsc-Chr212792 3511 6425 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212792g00001 33 516 Cytochrome P450 AT3G14690 46.626 2.78e-156 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212792g00001 - - aip:107623710 874.774