Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212791g00001 ATGCCTAAACCCTTCTCTAGCCACCATGATTGGTACAAAGCTACCCTTTCTTCTTTATCATTGGAAAATGACCATAATACCCCTCTTCCGTCAAATAAGCTAATCTATTCCTACAAAAATGTCATGAATGGTTTTAGTGCAAGTTTGACACCTCAAGAGCATGAACTCATCAAAGCCTCACCAGGTTACATTTCTTCAGCTCTTGATGTCAAAGTCAAACTCCACACAACACACACTCCAAAATTCCTTGGCCTTAATCCAAGTTTTGGTGCATGGCCTAGTTCACAATATGGCAAAGATGTAATTGTTGGTGTTGTGGACACTGGGATTTGGCCAGAAAGTGAGAGCTTCAAAGACAATAATGGTGGATTCAGCAATGTCCCTTCAAGATGGAAAGGTCAATGTGAGAATAGCATCCATTTCAATTCATCAAATTGCAACAAGAAACTCATTGGTGCTAAGTTCTTTAACAAAGGGTTTATTGCACATAACCCTAAGATCACGTTACACATGAGCTCTACCCGTGATATTGAAGGCCACGGTACCCATACCTCGTCGACCGCAGCGGGCAGCATAGTTCATAACGTATCTTACTTTGGGTACGCAAATGGAACAGCCACAGGAATAGCACCAATGGCACATTTGGCTATGTACAAAGCCTTATGGGGTGATGCTTCATACGCAACAGACGTAATTGCAGCCATTGATAGTGCAATTGAAGATGGTGTTGATGTTCTTTCACTCTCTTTCGGTTTCGATGATTTGCCGTTGGACTCTGACCCTGTCGCAATAGCAACGTTTGCAGCCGTGGAGAAAGGCATATTTGTAGCCGCTTCAGGAGGGAACGATGGACCCGACCTTCAATCACTTCATAACGGAACACCGTGGGTTATAACCGTTGCTGCTAGCACTGTGGACCGTAAGTTTTACGGAACACTCGTGCTAGGCAACGGTGTTGAAATTACCGGATTGTCCCTCTACCCGGGACCTAATGTAATTAGCCACACTTCAATAGTGTACATGGGGATTTGCAACAACACTAAGGAACTACACAAAGTTAAGGACAAGATTGTTGTGTGTGAGGGAAATAGATTAGTCTCTCTTGATGATCAAGTTTCAAAGATTGTCGACGCGAAAGTGTTTGCTTGTGTGTTCATAACAAATGATAATAGTGAGGAGATCTTGTTCTTCTTACAAGGCAATAATTTCCCATCAATTCTTGTTAATCCCATGGATGGTAAGATTATTAAGGATTACATTAGGGTTGGTGGTAATGATTTGAAAGCTGGCATGTCTTTTAAGATGACATCTTATGGTATAAAACCAAACCCTAGTCTTGATTTCTATAGCTCTAGAGGGCCGTCGTCTAGTTATCCGAATGTTCTCAAGCCGGACATAGCGGCTCCCGGAACGTTGATCTTCGCGGCATGGGCTCGCGTGTCTCCGGTGATGCAATTGGGATCCAAAGACCTTTTGAGCAATTTTAATGTGATAAGTGGAACATCAATGTCATGTCCTCATGTTGCGGGTGTAGCTGCCCTTCTTAAGGGTGCACACCCTCAATGGAGCCCTTCAATGATAAGGTCGGCAATTATGACAACTTCGGACATATTGGACAACAAAAATAAACACATCAAAGATCTTGGCAATGGTAAAGCAGCAAATCCTCTAGGCTTAGGAGCTGGCCATGTTAACCCAAATAAAGCACTTGACCCTGGCCTAGTTTACAATTTGGAGATGCAAGATTATGTGAACCTTTTTTGTGCAATGAACATGACACAAAAGCAGATCAAAACAATCACAAGAAGATCCTCATACAATTGCCCTAAAAACCCTAAATTGGATCTTAATTACCCTTCTTTCATTGCTTTCTATACTAATGAGTCAAGGACATTAGTGCATGAATTTCATAGGACAGTGACCAATGTTGGGGAGGGACATGCTATCTATGTTGCTAGTGTTACACCAATGAAAGGGTTCCATGTCAGCGTGGTCCCGGAGAAGTTAGAGTTCAAGATGAAGAATGAGAAGCAAAGTTACAAGTTGAGGATTGAAGGTCCAAAATTGATGATGATGAACAAGCAAATTCATTTTGGGTATCTAAGTTGGACCCATTTGAAGCATGTTGTGAGGAGTCCTATTGTGGTCACAAGCCTCCACTCACATAAACATATTTAA 2178 0.421 MPKPFSSHHDWYKATLSSLSLENDHNTPLPSNKLIYSYKNVMNGFSASLTPQEHELIKASPGYISSALDVKVKLHTTHTPKFLGLNPSFGAWPSSQYGKDVIVGVVDTGIWPESESFKDNNGGFSNVPSRWKGQCENSIHFNSSNCNKKLIGAKFFNKGFIAHNPKITLHMSSTRDIEGHGTHTSSTAAGSIVHNVSYFGYANGTATGIAPMAHLAMYKALWGDASYATDVIAAIDSAIEDGVDVLSLSFGFDDLPLDSDPVAIATFAAVEKGIFVAASGGNDGPDLQSLHNGTPWVITVAASTVDRKFYGTLVLGNGVEITGLSLYPGPNVISHTSIVYMGICNNTKELHKVKDKIVVCEGNRLVSLDDQVSKIVDAKVFACVFITNDNSEEILFFLQGNNFPSILVNPMDGKIIKDYIRVGGNDLKAGMSFKMTSYGIKPNPSLDFYSSRGPSSSYPNVLKPDIAAPGTLIFAAWARVSPVMQLGSKDLLSNFNVISGTSMSCPHVAGVAALLKGAHPQWSPSMIRSAIMTTSDILDNKNKHIKDLGNGKAANPLGLGAGHVNPNKALDPGLVYNLEMQDYVNLFCAMNMTQKQIKTITRRSSYNCPKNPKLDLNYPSFIAFYTNESRTLVHEFHRTVTNVGEGHAIYVASVTPMKGFHVSVVPEKLEFKMKNEKQSYKLRIEGPKLMMMNKQIHFGYLSWTHLKHVVRSPIVVTSLHSHKHI 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212791g00001 725 ProSiteProfiles Serine proteases, subtilase domain profile. 82 570 - -
Stsc212791g00001 725 Pfam Fibronectin type-III domain 615 716 IPR041469 -
Stsc212791g00001 725 Pfam Peptidase inhibitor I9 4 75 IPR010259 -
Stsc212791g00001 725 CDD Peptidases_S8_3 72 536 IPR034197 -
Stsc212791g00001 725 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 75 IPR037045 -
Stsc212791g00001 725 SUPERFAMILY Subtilisin-like 74 574 IPR036852 GO:0004252|GO:0006508
Stsc212791g00001 725 CDD PA_subtilisin_like 312 425 - -
Stsc212791g00001 725 Pfam Subtilase family 98 541 IPR000209 GO:0006508|GO:0008236
Stsc212791g00001 725 FunFam Subtilisin-like protease SBT1.5 100 315 - -
Stsc212791g00001 725 PRINTS Subtilisin serine protease family (S8) signature 499 515 IPR015500 -
Stsc212791g00001 725 PRINTS Subtilisin serine protease family (S8) signature 176 189 IPR015500 -
Stsc212791g00001 725 PRINTS Subtilisin serine protease family (S8) signature 98 117 IPR015500 -
Stsc212791g00001 725 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 716 IPR045051 -
Stsc212791g00001 725 Gene3D Peptidase S8/S53 domain 100 583 IPR036852 GO:0004252|GO:0006508
Stsc212791g00001 725 Gene3D - 306 439 - -
Stsc212791g00001 725 ProSitePatterns Serine proteases, subtilase family, serine active site. 500 510 IPR023828 -
Stsc212791g00001 725 Gene3D - 587 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212791g00001 Stsc-Chr212791 8836 12011 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212791g00001 2 719 Subtilisin-like Serine Gene Family AT5G67090 44.851 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212791g00001 - - gmx:100781249 884.789