Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212789g00001 ATGATGATTGAAACTAACTCAACCAAAAGCAGCTGCCAAGCGAAGCAAGAAGACGACGCCGCCGCAGGCGTCACTGGAAAATTCTCGAAAACTCTACCTTCCACTTCCTCAAGACAATGGACAGCGTTCAGAAATCCAAGAATCGTTCGAGTTTCGCGGTCTTTGGGAGGGAAAGACAGGCACAGCAAGGTTTGCACCGTTAGAGGCCTAAGAGACCGGAGGATTCGACTCTCGGTTCCGACGGCAATTCAGTTATACGATCTCCAACACCGGCTCGGAGTGGGTCAACCCAGTAAGGTCATAGATTGGTTGCTTGAAGCCACCAAACTCGACATTGATAAGCTTCCGCCACTTCAAATCCCTCAGGGTTTCGCCCAATTCCACCACCAACAAACCCTAATTCCCCTTTCTCATCATCATGATCCATCACTTATCGCTAGCAGTTCCCCTTTTTCTCTTGGAGGATTCTACGATGGAAACTCCTCAAGGTTTTGGGAGATGAAAGGTAAAGAATCTGATACTAGTAATAATGGCGTGTTCTCTGAGAAAGGAAAATGGATCAAAACAAATCAAGAACAACATGATGATGGTGATGATGATGGAAATCAAGAAGGATTGTTGTTGTTGAACAATGCTATGGGATATAATCATAATAATAATTCTAATTCTTCTTTAGATCCTTCAAGCTTATTAACTTTATCATCATCTTCATCATCATCACAATTTGGAAGCCATGTGTTATTGTTAGATCCCCATTCTTCTAACTTTTTGCAGCAATTTTCATCATCTTCTTCTACAACAACACCATCAGTTTTCAGTTCCTATTGTACTCCATTTACAGCTAATAATTCTTCATCATCATCGTTATCAACAGTAGTGGAAAGTAATAACAGTGAAGCAATAAGACACTTCAACCATGTTCAGATCTTGAGTTCTCAAGTGATGCCTCATCATCATCATTATCCCTTTATTCCATCATCTTCTCTTTTTAACTCAATTGTCAGTAATAACAATTCAGCTGCTGCTACTATCAGACGTGTTTCAATGCCATTTAGTTCCAAGCTTCTTGATTCAGACGATAACAACAATAATGGTGGAAGCAACCAACAAAATCATCATCACCATAAAG 1129 0.4057 MMIETNSTKSSCQAKQEDDAAAGVTGKFSKTLPSTSSRQWTAFRNPRIVRVSRSLGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQHRLGVGQPSKVIDWLLEATKLDIDKLPPLQIPQGFAQFHHQQTLIPLSHHHDPSLIASSSPFSLGGFYDGNSSRFWEMKGKESDTSNNGVFSEKGKWIKTNQEQHDDGDDDGNQEGLLLLNNAMGYNHNNNSNSSLDPSSLLTLSSSSSSSQFGSHVLLLDPHSSNFLQQFSSSSSTTTPSVFSSYCTPFTANNSSSSSLSTVVESNNSEAIRHFNHVQILSSQVMPHHHHYPFIPSSSLFNSIVSNNNSAAATIRRVSMPFSSKLLDSDDNNNNGGSNQQNHHHHK 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212789g00001 376 MobiDBLite consensus disorder prediction 1 15 - -
Stsc212789g00001 376 MobiDBLite consensus disorder prediction 355 369 - -
Stsc212789g00001 376 MobiDBLite consensus disorder prediction 1 36 - -
Stsc212789g00001 376 MobiDBLite consensus disorder prediction 355 376 - -
Stsc212789g00001 376 Pfam TCP family transcription factor 57 170 IPR017887 -
Stsc212789g00001 376 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 10 365 IPR005333 GO:0003700
Stsc212789g00001 376 ProSiteProfiles TCP domain profile. 57 115 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212789g00001 Stsc-Chr212789 14645 15773 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212789g00001 40 196 TCP Transcription Factor Family AT5G60970 53.977 4.39e-50 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Stsc212789g00001 TCP 6.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212789g00001 - - ahf:112722599 376.711