Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212780g00003 ATGGAAACAAGCACCAAAGAAGACTTGGAAATCAAGAAAGTGAATTGTGATGCTTCGGAGATTGAGTATGTTAGTTATGGCGGCGAGCACCACCTCCCCCTTATCATGAACCTAGTCGACCAAGAACTCAGCGAGCCTTACTCCATATTCACGTATCGATACTTTGTCTATCTCTGGCCTCAGCTCTCTTTCTTGGCATTCCACAAGGGTAAATGTGTCGGCACAGTGGTTTGTAAGATGGGTGACCATCGAAACGTTTCCAGGGGGTACATTGCCATGTTGGTTGTGATCAAGCCCTACAGGGGAAAAGGCATTGCTACAGAACTTGTTACTAGGTCTATTAAGGTGATGATGGAATCTGGTTGTGAAGAAGTTACACTGGAATCAGAAGTTACAAACAAAGGAGCATTGGCACTCTATGGTCGCCTTGGCTTTATTAGGGCTAAGAGGCTTTTTCATTATTATTTGAATGGAGTCGATGCTTTCCGGCTCAAACTGCGATTCCCTCGGCCGGAGCTGCACCCATCTCTGCCTGTGATGGCAGATAAATATGGTAGTCATATACCAAGTGATCATGATAATTCAGCATTTGAACAATGA 600 0.4467 METSTKEDLEIKKVNCDASEIEYVSYGGEHHLPLIMNLVDQELSEPYSIFTYRYFVYLWPQLSFLAFHKGKCVGTVVCKMGDHRNVSRGYIAMLVVIKPYRGKGIATELVTRSIKVMMESGCEEVTLESEVTNKGALALYGRLGFIRAKRLFHYYLNGVDAFRLKLRFPRPELHPSLPVMADKYGSHIPSDHDNSAFEQ 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212780g00003 199 Gene3D - 28 179 - -
Stsc212780g00003 199 FunFam N-alpha-acetyltransferase MAK3 isoform A 28 182 - -
Stsc212780g00003 199 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 19 169 IPR000182 GO:0016747
Stsc212780g00003 199 Pfam Acetyltransferase (GNAT) family 56 145 IPR000182 GO:0016747
Stsc212780g00003 199 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 29 170 IPR016181 -
Stsc212780g00003 199 CDD NAT_SF 63 128 - -
Stsc212780g00003 199 PANTHER N-ALPHA-ACETYLTRANSFERASE 30 6 172 IPR044542 GO:0004596|GO:0017196
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212780g00003 Stsc-Chr212780 13339 15649 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc212780g00003 Acetyltransf_1 1.9e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212780g00003 K00670 - gmx:100806790 346.665