Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212755g00003 ATGGGAGTTCTCATTCCCCTCTCCTTCTTCTTCTTCCTCCTCATCCGCATCTTCTTTCAGTTATGGCGAACAAAGAAGCTCTCACACCTCATTTCTTTCTACAAGAACCGTAACCGCTTACTTGAGTGGTTCACGGAGCTTCTTGCCGAGTCACCAACCAACACCATCGTGGTTCACCGCTTAGGCTCACGTAGAACCATTGTAACAGCCAACCCTTCCAACGTTGAGTACATTCTCAAGACCAACTTCTTCAACTTCCCCAAAGGCAAGCCTTTCACTCATGTGTTGGGTGATTTTCTCGGCAACGGGATTTTCAACGTGGATGGTGACCGTTGGTTTAGTCAACGTAAGGTCGCAAGCCATGAGTTCTCAGCAAGGTCTCTAAGGGAGTTCTTAATGTACACTCTGGCGGAAGAGGTCCACAGGAGGCTCGTCCCTGCGCTAGAGGGAGTTTCCTATGGTGATGACGGCGTTCTGGACTTGCAAGAGATTCTGACGAGATTCTCGTTCAACGTGATCTGTAAGTTCGCCATGGGAAGTGGTAATGTGTGTTCTTTGGATCCTTGTGTCCCCGTTTCTTCGCTCTGGAGAGCGTTCAACGTGGCGGCCGCAATATCGGCGAGGCGAGGGGCGGCTCCTTTGTTTGTTATTTGGAAGGTGAAGAGATTGCTTCGGGTTGGATCTGAGCGGAGGCTTAAAGAAGCCGTTCTTGAGGTTCACACGCACGTGATGAATATGATTCATGAGAAGAAGAAAAAGAGGAAGAAGAAGGAGGAGGAGGAAAAGGAGATGATGAAAAGTAATAGAGAAGATTTAATGTCAAGGCTTATATGCGGTGGTTATGAAGGTGATGTTATTAGGGACATGGTGATAAGTTTTGTGATGGCTGGGAAGGACACAACTTCAGCGGCATTGACATGGTTCTTTTGGATATTGTCACATTATCCTCACGTGGAGGAAAAGATTTTGAAAGAGGCAGAGGCAAATGAGCCGTTAAATTATGAGTCACTTAAGAGGTTAAATTTCTTGAAAGCGTGCCTGTGTGAGTCAATGAGGCTTTTCCCACCGGTGGCATGGGACTCAAAGCATGCCTCATGTGATGATGTGTTGCCAGATGGCACTGTGGTCAAAGCAGGAGATAGGGTCACTTATTTTCCATATGGAATGGGGAGAATGGAAGAGTTGTGGGGGTTGGATCGGTTTGAGTTCCGGCCAGAGAGATGGTACATTGGAGGAAAGTGGAGTGAGGTTTCTCCTTTCAAGTTTCCAATTTTTCAGGCTGGTCCAAGGGTGTGTTTGGGCAAGGAAATGGCTTTCGTTCAAATGAAATATGTGGTGGTTGCAATTCTCAAAAGGTTTAGGATCAGACCCGTTAGCACAAACAAGCCTACGTTTGTGCCACTTCTCACTGCACACATGGCCGGCGGCTTAAAGATATTGATTTCAAATAGGGAGAATTAA 1461 0.4682 MGVLIPLSFFFFLLIRIFFQLWRTKKLSHLISFYKNRNRLLEWFTELLAESPTNTIVVHRLGSRRTIVTANPSNVEYILKTNFFNFPKGKPFTHVLGDFLGNGIFNVDGDRWFSQRKVASHEFSARSLREFLMYTLAEEVHRRLVPALEGVSYGDDGVLDLQEILTRFSFNVICKFAMGSGNVCSLDPCVPVSSLWRAFNVAAAISARRGAAPLFVIWKVKRLLRVGSERRLKEAVLEVHTHVMNMIHEKKKKRKKKEEEEKEMMKSNREDLMSRLICGGYEGDVIRDMVISFVMAGKDTTSAALTWFFWILSHYPHVEEKILKEAEANEPLNYESLKRLNFLKACLCESMRLFPPVAWDSKHASCDDVLPDGTVVKAGDRVTYFPYGMGRMEELWGLDRFEFRPERWYIGGKWSEVSPFKFPIFQAGPRVCLGKEMAFVQMKYVVVAILKRFRIRPVSTNKPTFVPLLTAHMAGGLKILISNREN 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212755g00003 486 Coils Coil 243 275 - -
Stsc212755g00003 486 Pfam Cytochrome P450 54 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212755g00003 486 PANTHER CYTOCHROME P450 24 478 - -
Stsc212755g00003 486 SUPERFAMILY Cytochrome P450 27 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212755g00003 486 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212755g00003 486 PRINTS P450 superfamily signature 432 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212755g00003 486 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212755g00003 486 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212755g00003 486 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212755g00003 486 PRINTS E-class P450 group I signature 432 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212755g00003 486 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212755g00003 486 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc212755g00003 486 CDD CYP86A 55 477 - -
Stsc212755g00003 486 Gene3D Cytochrome P450 20 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212755g00003 Stsc-Chr212755 10503 12083 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212755g00003 1 486 Cytochrome P450 AT3G48520 54.314 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212755g00003 K20665 - gmx:100786130 626.32