Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212700g00003 ATGGCTTCAGTTCCAGGGCAATTGGTGTGGGAGATCGTGAAGAAGAACAACTGCTTCTTGGTGAAAGAGTTCGGAAGGGGCACTCAGAGTGTTGAATTCAGCAGAGAGCCTAACAATCTCTACAATCTCAACTCTTTTAAATACTCAGGTTTGGCAAACAAGAAAACTGTTACCATTCAGCCTGCTGGTAAGGATCAGGGTGTGTTGTTGGCTACAACTAAGACCAAGAAACAGAACAAGCCATCTGCTCATCTTCACAAGTCTCTGATGAAGAAGGAATTCAGTAGGATGGCTAAGGCTGTTCAAAATCAGGTGACAAAGAACCACTACAGGCCTGATCTCACAAATGCAGCTCTTGCAAGGTTGAGTGCCGTCAATAGAAGCATCAGAGTTGCCAAGTCTGGTGTCAAGAAGAGGAACAGACAGGGCTTGAAGATCCGTGGCAGGAAGTGA 453 0.457 MASVPGQLVWEIVKKNNCFLVKEFGRGTQSVEFSREPNNLYNLNSFKYSGLANKKTVTIQPAGKDQGVLLATTKTKKQNKPSAHLHKSLMKKEFSRMAKAVQNQVTKNHYRPDLTNAALARLSAVNRSIRVAKSGVKKRNRQGLKIRGRK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212700g00003 150 Gene3D - 6 133 - -
Stsc212700g00003 150 PANTHER 60S RIBOSOMAL PROTEIN L28 1 150 IPR002672 GO:0003735|GO:0005840|GO:0006412
Stsc212700g00003 150 FunFam 60S ribosomal protein L28 5 133 - -
Stsc212700g00003 150 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212700g00003 Stsc-Chr212700 14744 17431 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212700g00003 1 143 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 71.329 3.02e-75 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212700g00003 K02903 - gmx:100500189 256.529