Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212699g00003 ATGTTTGGCATAGCAGCAGGAGCAAATGAAAAATTTCCAGCGTTATTCGCATTTGGAGATTCCATTCTTGATACCGGAAATAACAACAACCTTCTAACATTAACCAAGTCTAATTTTCCTCGGAATGGAAGGAATTTCATTGTAGGACAACCAACCGGAAGATTCTCTGACGGCAAAGTCCTCTCGGATGTCATAGCGGATGCTCTTGGAATCAAAGACACATTACCTCCATATCTTGATCCAAAGTTGCGGAACGAAGAGCTTTCGACGGGAGTATGCTTCGCTTCAGCTGGCTCAGGAAACGATGATCTCACGTCAGATATAAAGCTGGAAACAATGACATTGCCATCACTTATTCTTCCACCATCAAAAGAAACATACCTTTCCCTCTCTATGCCTCAATTAGTTGCATCCGCCTCTCATTTCATCAAGCAACTGTATGAAATTGGAGCAAGAAAAGTGTGGGTTCTGAGTACATTGCCACTGGGGTGCCTGCCTGGAAGGAGAACCGCAGGAGGAGGACCATTAAGATTGTGTGCTGATATTGTGAATGGACAAGCTCAATTATTCAATGCCCGATTAGCATCCGCTGTCACATCTTTGCAACGCACTCTTCCCGCTTCGTCCCTTCAATTCCTTGATGTCTATACTCCACTCCTTAATATCATACAAAATCCTTCAACTGCAGGGTTTTTTAATATGGCAAACGGATGTTGTGGAAGAGGACAAACTGAGATGGCAACCACCTGTACCTTACTTGTTGGTTCCTGTCCAAATCCTAAATCTTACATTTTCTGGGACGCTGGTCATCCAACTCAAAGGGCGTATGAGGTTATAGCAGAGGCTATACTATCCAATACTACTTATTTAAGATGA 876 0.4315 MFGIAAGANEKFPALFAFGDSILDTGNNNNLLTLTKSNFPRNGRNFIVGQPTGRFSDGKVLSDVIADALGIKDTLPPYLDPKLRNEELSTGVCFASAGSGNDDLTSDIKLETMTLPSLILPPSKETYLSLSMPQLVASASHFIKQLYEIGARKVWVLSTLPLGCLPGRRTAGGGPLRLCADIVNGQAQLFNARLASAVTSLQRTLPASSLQFLDVYTPLLNIIQNPSTAGFFNMANGCCGRGQTEMATTCTLLVGSCPNPKSYIFWDAGHPTQRAYEVIAEAILSNTTYLR 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212699g00003 291 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 15 26 IPR008265 GO:0006629|GO:0016298
Stsc212699g00003 291 Pfam GDSL-like Lipase/Acylhydrolase 15 103 IPR001087 GO:0016788
Stsc212699g00003 291 Pfam GDSL-like Lipase/Acylhydrolase 132 283 IPR001087 GO:0016788
Stsc212699g00003 291 SUPERFAMILY SGNH hydrolase 129 284 - -
Stsc212699g00003 291 Gene3D SGNH hydrolase 115 288 IPR036514 -
Stsc212699g00003 291 PANTHER GDSL ESTERASE/LIPASE EXL3 134 282 - -
Stsc212699g00003 291 CDD SGNH_plant_lipase_like 13 286 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212699g00003 Stsc-Chr212699 10242 11405 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212699g00003 5 284 Pollen Coat Proteome AT1G75930 34.954 2.61e-59 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212699g00003 - - aip:107646231 350.132