Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212699g00001 ATGTTACTAATGAGCTTGTGCAAGAGGACGAAAGGTGTGTTGCAGCTGCCAGCAAATGTTTCAGTTCCAGCGGTGCTAGCATTCGGAGACTCAATCATGGACACTGGAAACAATAACGGCTTAAAAACGCTGGTAAAGTGCAACTTCCCTCCTTATGGCAAAGATTTTGAGGGTGGAACCCCAACCGGTCGCTTTTGCAATGGAAAAGTTCCCTCCGATCTCTTAGTTGAAGAATTAGGAATCAAGGAATACATGCCAGCTTATTTGGATCCGAATCTGAAAGGGAGTGATCTTTTGAGCGGTGTGTGTTTTGCCTCCGGTGCTTCAGGATATGATCCTTTGACACCCAAAATAGCGTCAGTAATACCAATGTCAGATCAATTGGACATGTTCAAGGAATACATAGGGAAAGTGAAAGGCATTGTAGGAGAAGAGAGAGCAAAGTTCATCGTAAGCAACAGTCTGTACGTAGTGGTGGCTGGGAGCGATGACATTGCAAACACGTACTTTGTTGTTCACGCGAGAATACAGTACGATATTCCTGCTTACACAGACCTTATGTCCAATTCAGCATCAAGTTTTGTTAAGGAACTATACAAATTAGGGGCTCGAAGAATAGCAGTGCTGAGTGCACCACCAATTGGATGCGTGCCATCACAGAGAACACTGGCCGGAGGGATAGTGAGAAAGTGCTCAGAGAAGTACAATGAGGCTGCTAAATTGTTTAACTCAAAATTGGAAAAGGAGCTGGATTCCCTTAATCGCAACTCTCCCAATGCCCGCATTGTCTACATTGATGTTTACAACCCTCTGCTTGATATCATTCTCAACTACCAAAATTATGGGTATAAAGTTGTGGACACAGGTTGCTGTGGGACAGGGAAACTGGAGGTTGCAGTGTTATGCAACCCTTTGGATGCAACTTGCCCTAATCCTTCCGAATATGTCTTTTGGGATAGTTATCATCCCACAGAAGGAGTATACAGAATATTAATATCTCAAGTTCTTCGCAAGTATTTCAATCAATTGTTGGGTCACCTTCCATGA 1047 0.4355 MLLMSLCKRTKGVLQLPANVSVPAVLAFGDSIMDTGNNNGLKTLVKCNFPPYGKDFEGGTPTGRFCNGKVPSDLLVEELGIKEYMPAYLDPNLKGSDLLSGVCFASGASGYDPLTPKIASVIPMSDQLDMFKEYIGKVKGIVGEERAKFIVSNSLYVVVAGSDDIANTYFVVHARIQYDIPAYTDLMSNSASSFVKELYKLGARRIAVLSAPPIGCVPSQRTLAGGIVRKCSEKYNEAAKLFNSKLEKELDSLNRNSPNARIVYIDVYNPLLDIILNYQNYGYKVVDTGCCGTGKLEVAVLCNPLDATCPNPSEYVFWDSYHPTEGVYRILISQVLRKYFNQLLGHLP 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212699g00001 348 FunFam GDSL esterase/lipase APG 14 340 - -
Stsc212699g00001 348 Pfam GDSL-like Lipase/Acylhydrolase 25 333 IPR001087 GO:0016788
Stsc212699g00001 348 PANTHER GDSL ESTERASE/LIPASE EXL3 21 335 - -
Stsc212699g00001 348 Coils Coil 236 256 - -
Stsc212699g00001 348 CDD SGNH_plant_lipase_like 23 339 IPR035669 -
Stsc212699g00001 348 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 25 36 IPR008265 GO:0006629|GO:0016298
Stsc212699g00001 348 Gene3D SGNH hydrolase 13 339 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212699g00001 Stsc-Chr212699 519 2951 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212699g00001 19 343 Pollen Coat Proteome AT1G75910 42.857 4.38e-82 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212699g00001 - - ahf:112759151 640.188