Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212686g00002 ATGGAAGCCACTTCTTTGACTCATCAGTTGTTGAAGGGTTTTCGTGATGGTACACAGTGGAAGTATGCTGTCTTTTGGAAGCTTAACCACCGCTTCCCCATGACTTTGACCTGGGAAGATGGATATTATGATTACCAGAAATCTAATGAGACAGTGGGGAGTATGTGGGGTGACATCAATCTCAAATTCCCAGCTGAGACTTCAAGTGGTGAAAGTATTGATGATCCGGGGGATTATTCTGCTGGACTACTCATGGCTGAAATGTCTCATCATAAATACACTTTGGGAGAGGGGGTTGTTGGTAAGGTAGCTTTTACTGGGAATCATTGTTGGGTTAGTGAGGATATTCTAACCTGTGGGTTGGACGCTAATTTAATACCTGAGTGTCCTGATGAATGGCTTCTTCAATTTGCCTCTGGCATCAAGACCATCGTGCTGATACCAGTTCTTCCTCAAGGAGTTTTGCAATTTGGTTCATTTCAAGCGGTTGCTGAAGACCTGGAATTTGTTACCAATATCAAGGAGAAATTCCAGTCCATTCATCTTCTGGAAGCAAATACTACAGCATTGAACTCTGGAGTTGATTATCAATATTGGTCATTCTCAGCCCCAACAAATACTTTTATGAATATCTTGGATGAATCATCCAATATCACAAACAGTACACCAAAAACCGAAGTTTTGGGTAGAATTGCACCTTGTGTGAATGCATCAACAAGATTGAACCCAGCGATGTTGTCTCAGGTGGAGATAAAAGATAATCTGGACGAAGAGATATGGCCCTCTTCTCCATTGGTCAATGATTTGGGAGTATTCCGAGAGATATCAAATGGATTAGGTTTATACTCTGGTAAGATGGAGCAACAATTTGGAAGCAATGAAACTGGTTATGAGGATATGAAGAATCTGAATGGCTTCTTTGCTTTTCCCTCAGAGTCTGAATTGCACAAAGCGCTTGGATCAGCAGCTCCATGCAGGAAAACAAGTGATTCCATGTCTAAACATACCTCTGTTGAGGATACTTACAGTAACTCGACCTTCATATCCAATAATAAAGAACATGGTTATGCTGAGAGTTTGGAGCACACTGAAGATGTTGATCCGAAATATCTCTTGGATGCTGCTTTTGGGGATTTATTTAGTGCCTGTGATGATACTTCAAGCATATCCAACAGTTTTAGGTCCCATGTAAGCAAGCAGATGGCGTTTACCGGTTCAATTCATCCCAGGATCAGTTGCGAAGAAAGCAGTTTGGTTACGAAAGGTGTGAAAAGTGATCTTAAGCCGGCAGTTACGGTCAAGGGCGGAGATGCTATTGCATCACCATCTTTTGATGGAAATTCAAGCTTATTGACTGATGAGCCTCAAGAAGAACAGGTTTATAGTCATGTGCGATCTACTAATGGACCAAATATCTCTAGAACCAACAAGAAAAGAGCAAGGCCAGGTACTATCCAAAAGTCAAGGCCGAGAGATAGACAATTGATCATGGACAGGATGAAGGAGTTGAGGGAGCTTGTCCCAGATGGTGGAAAGTGTAGCATTGACAACCTCTTGGAGAAAACCATAAAGCATATGCTATACTTGAGAAAAATAACAAGCCAAGCTGAGAAGCTTAAGAGATTCGAACATAGAGAGGTTCCCAAAGGCAGCAAACAGAAGATCAATTCTAACCAATCAGGGAGGAGCTGTGCATATGACTTGGAAAGTGAACAAGCATGGCCCATAGTCATAGAAGATCTGGAATGCTCAGGCCACATGCTCATTGAGATGGTGTGCAATGAGCATGGATTCTTCTTGGAGATTGCTCAGGTCATACGGAAGCTGGACCTCACCATCTTGAAAGGTGCCTTAGAAAACCACTCATCCGCTGCCTGGGCTCGTTTCATTGTCGAGGCTCCAAGAGGGTTTCACAGGATGGATGTTTTATGTCCTTTATTGCACCTTCTACAGCGGAGGAGTAACCCTGTTCCATATAAAAGCTGA 1986 0.426 MEATSLTHQLLKGFRDGTQWKYAVFWKLNHRFPMTLTWEDGYYDYQKSNETVGSMWGDINLKFPAETSSGESIDDPGDYSAGLLMAEMSHHKYTLGEGVVGKVAFTGNHCWVSEDILTCGLDANLIPECPDEWLLQFASGIKTIVLIPVLPQGVLQFGSFQAVAEDLEFVTNIKEKFQSIHLLEANTTALNSGVDYQYWSFSAPTNTFMNILDESSNITNSTPKTEVLGRIAPCVNASTRLNPAMLSQVEIKDNLDEEIWPSSPLVNDLGVFREISNGLGLYSGKMEQQFGSNETGYEDMKNLNGFFAFPSESELHKALGSAAPCRKTSDSMSKHTSVEDTYSNSTFISNNKEHGYAESLEHTEDVDPKYLLDAAFGDLFSACDDTSSISNSFRSHVSKQMAFTGSIHPRISCEESSLVTKGVKSDLKPAVTVKGGDAIASPSFDGNSSLLTDEPQEEQVYSHVRSTNGPNISRTNKKRARPGTIQKSRPRDRQLIMDRMKELRELVPDGGKCSIDNLLEKTIKHMLYLRKITSQAEKLKRFEHREVPKGSKQKINSNQSGRSCAYDLESEQAWPIVIEDLECSGHMLIEMVCNEHGFFLEIAQVIRKLDLTILKGALENHSSAAWARFIVEAPRGFHRMDVLCPLLHLLQRRSNPVPYKS 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212686g00002 661 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 177 IPR025610 -
Stsc212686g00002 661 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 294 656 IPR043561 GO:0003700|GO:0006355
Stsc212686g00002 661 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 480 529 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212686g00002 Stsc-Chr212686 10875 16774 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212686g00002 471 655 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 43.415 2.43e-44 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212686g00002 - - adu:107484428 1153.66