Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212665g00004 ATGCTGGAACTAAAGAATAAGGAAATCTCGGACCAGATTGACAAGCATAGTGATCGGACAGAATTAGACCTCTTAAGGCAGAAAATTGCAGATCAGAATCAGAAAATTGACACTTATAGTAAGCAACATGATGAGTTAAACAAGCATATAGAAGAGCTCACTTCGGACTACGAGCTTTTGAAGAGGGAAAACCTGGATATCTGTTTGAGATTAAAGCAAGTAGAAGCACAACATAAGATGTTACAAAAGAAATATTCAGCTTCACTGACTGCCATTGAACAACTTGAATCACAGGTAGAGATATTAGAAGAAAATATAAAGAATCAGGAAGATGAATTTTCAGAGTCTTTGGTCTACGTCAATGAGCTTGAAAATCAAGTCAATAATTTGGAGAGAGAACTGAAAACACAGGCAGACAAGTTTGAAGAAGATCTGCATTCTTTCAAATGTGCAAAAATTGAGCAAGAAGAACAGGCCATGAAAGCTGAGGAGGCCTTGAGAACCACGATACACAATAATGCTCTCATATCTGATCGTTTTCAGGATGAACTTAGAAGGCTTTCAGTTGAAATGACATCGAAAGTAGAAGAATATGAAAGGATGATCATTAAAGCCAATACAGAAGCTGATGAATTGCAGAAGCAGAACAAAATTATGGAAGAAACTCTACAGAAATGCAATCAAGAGCTCAGGCTAATTACAAACCAGAATGATTTGAAACTGCAAGAGCTCTTGAACCAAATAAATTTGAAAGAAAAAGCAGTAGAGATGTTGACACAAGAACTTGAGGTTAAATCTAAACAACTTGAAAATGCACAAAGGCAAAAGGATGAAAAGGATCGGGCATTATCAAAGCAAATTCAGGTTCTTAGGATTGAAATTAAGAAGCTGATGGTAGAAAAGCACGCATTTTCTAAAGCAAAGTCAACAGAGCAAATGACCGAGGCGGTATTTCAAGGGCACCAAGATGTGGATAAGATACTCGGCACCCTAATGACAGAAGTGGAAATCTTGAAGAACCATCACAAAGAACTGACAAATATCCTGCAGAAAGAACATGCCGAGAAAGAAAAAATGTCTAAAACTATATCTCAACTAGACGGAGAGGTTAAGAAGAAAGCAGCAGAATTAAGCATTATGGAAAAGAAGCAGACGAATAACAAAAGACAACCAGCAACAACACACATGAATTTGACTTCAAGAGACGCTGAGTGTTATGGTGCATCTCCTTCCAATGAGGAACAGCTAAAATCAAATTCAGAATGGCACAAGGGCATGGATGCTGGAAATACTGCTGTTGGGTTGGAAGAAAAAGGAATAGGCAATTCGGCTGAGAACAAAGTTTGTCAAGACAGAAGTGATGTGAAAACTTGCTTGGCAAATGAGGTGACTCTCTTCAATCATGATCATAGTGGTCAGTGCCACACAAATGAATTGTTGAATGAAGTGGCACTCCTAAAGGAAAGGAATAGATATATGGAGAGTGAGCTGAAAGAATTGGAAGAAAGATATTCGGACATTAGCCTTAAATTTGCAGAGGTAGAGGGAGAAAGACAACAGCTTGTTATGGCTCTACGTAGTATCAAGAATGGTAAGAGCTTAAATTCTTAA 1611 0.3786 MLELKNKEISDQIDKHSDRTELDLLRQKIADQNQKIDTYSKQHDELNKHIEELTSDYELLKRENLDICLRLKQVEAQHKMLQKKYSASLTAIEQLESQVEILEENIKNQEDEFSESLVYVNELENQVNNLERELKTQADKFEEDLHSFKCAKIEQEEQAMKAEEALRTTIHNNALISDRFQDELRRLSVEMTSKVEEYERMIIKANTEADELQKQNKIMEETLQKCNQELRLITNQNDLKLQELLNQINLKEKAVEMLTQELEVKSKQLENAQRQKDEKDRALSKQIQVLRIEIKKLMVEKHAFSKAKSTEQMTEAVFQGHQDVDKILGTLMTEVEILKNHHKELTNILQKEHAEKEKMSKTISQLDGEVKKKAAELSIMEKKQTNNKRQPATTHMNLTSRDAECYGASPSNEEQLKSNSEWHKGMDAGNTAVGLEEKGIGNSAENKVCQDRSDVKTCLANEVTLFNHDHSGQCHTNELLNEVALLKERNRYMESELKELEERYSDISLKFAEVEGERQQLVMALRSIKNGKSLNS 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212665g00004 536 Coils Coil 241 289 - -
Stsc212665g00004 536 Gene3D - 2 177 - -
Stsc212665g00004 536 Coils Coil 483 517 - -
Stsc212665g00004 536 Coils Coil 85 140 - -
Stsc212665g00004 536 Coils Coil 22 63 - -
Stsc212665g00004 536 Coils Coil 195 236 - -
Stsc212665g00004 536 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 468 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212665g00004 Stsc-Chr212665 12134 14417 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212665g00004 19 225 Myosins gene family AT1G17580 27.982 5.82e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212665g00004 - - aip:107644825 884.789