Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212641g00002 ATGGCTAATAAAGCAGTTCATTCATTAGGGTTGTTGTGTGTGCTACTTTTGGTGCATAAGGGTGCTGATGCCTATGATTTCATAGTTGGAGGCCAAAAGGGTTGGAGTGTTCCAAGTGATTCCAATTTCAATCCTTTCAATGCATGGGCTGAAAAGAGCCGTTTTCAAATCGGAGACTCTCTAGTTTTCAACTACCAATCGGGGCAAGACTCAGTGCTACAAGTGAAGAGCGAAGACTATGCAAGCTGCAACACAAACTCACCATATGCAAAGTTCTCAGACGGTCACACAGTCTTCAAGCTAACCCAATCAGGCCCATACTTCTTCATCAGCGGTAACAAAGATAACTGCCTCAAGAACGAGAAGCTAACCGTCATTGTAATGGCTGACAGATCCAACCGCACCTCGTCCACCAACTCAAACTCTACAACAAGCCCCCCCACTTCTTCCCCACCTTCACCGCAGCCATCGACGCCTTCTCCGGCACCAACCGGCCAAGGAGCTCAGTCTTCTCCGCCACCTGCTGGAACAGTGGAAACTAACCCAACCCCGGCACCTTCCAGTGAAGGACATCATCCTCCTAACTCCGCCGCCTCGGCCTTCGTCAACTTTGCTGGTCCAGTTGGAGCTATAGTCATGGCTTCTTCAGCTCTCATGTTATCTCTCTAG 669 0.4933 MANKAVHSLGLLCVLLLVHKGADAYDFIVGGQKGWSVPSDSNFNPFNAWAEKSRFQIGDSLVFNYQSGQDSVLQVKSEDYASCNTNSPYAKFSDGHTVFKLTQSGPYFFISGNKDNCLKNEKLTVIVMADRSNRTSSTNSNSTTSPPTSSPPSPQPSTPSPAPTGQGAQSSPPPAGTVETNPTPAPSSEGHHPPNSAASAFVNFAGPVGAIVMASSALMLSL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212641g00002 222 Gene3D - 25 141 IPR008972 -
Stsc212641g00002 222 Pfam Plastocyanin-like domain 35 119 IPR003245 GO:0009055
Stsc212641g00002 222 MobiDBLite consensus disorder prediction 162 194 - -
Stsc212641g00002 222 MobiDBLite consensus disorder prediction 130 146 - -
Stsc212641g00002 222 MobiDBLite consensus disorder prediction 147 161 - -
Stsc212641g00002 222 CDD OsENODL1_like 25 128 IPR041846 -
Stsc212641g00002 222 MobiDBLite consensus disorder prediction 130 200 - -
Stsc212641g00002 222 SUPERFAMILY Cupredoxins 24 128 IPR008972 -
Stsc212641g00002 222 PANTHER BLUE COPPER PROTEIN 25 146 IPR039391 GO:0009055
Stsc212641g00002 222 ProSiteProfiles Phytocyanin domain profile. 25 129 IPR003245 GO:0009055
Stsc212641g00002 222 FunFam Early nodulin-like protein 9 25 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212641g00002 Stsc-Chr212641 3209 4922 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212641g00002 9 201 Phytocyanin Superfamily AT3G20570 53.886 2.72e-57 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212641g00002 - - gmx:100792916 271.552