Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212634g00001 ATGATGAGATTCTTCAATCATGCAACTGCTAGTGACTCTCAAATCATAAACTTTGCATTGAGAGATCATGGTGTTGTCTCTGAAGGGTTGGAATCAATTGTAGATGTTGCTGGAGGAACAGGAATGGTAGCCAAGTATCTTTCTGAGACATTTCCACATTTGAAATGCATGGTTTTTGACCTTCCACATGTTGTAGAGAATTTGTCAGGAAGCAACAATTTGAGCTATGTTGGTGGGGACATGTTTCAATCTATCCCTAAGGCTGATGCAGTTTTACTCAAGTGGATTTTACATGATTGGAATGAGATGATTGCAAGGAGATATTAA 327 0.3853 MMRFFNHATASDSQIINFALRDHGVVSEGLESIVDVAGGTGMVAKYLSETFPHLKCMVFDLPHVVENLSGSNNLSYVGGDMFQSIPKADAVLLKWILHDWNEMIARRY 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212634g00001 108 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 108 IPR016461 GO:0008168
Stsc212634g00001 108 PANTHER O-METHYLTRANSFERASE 2 102 IPR016461 GO:0008168
Stsc212634g00001 108 Gene3D Vaccinia Virus protein VP39 1 108 IPR029063 -
Stsc212634g00001 108 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 3 104 IPR029063 -
Stsc212634g00001 108 Pfam O-methyltransferase domain 3 102 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212634g00001 Stsc-Chr212634 6918 7744 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212634g00001 3 102 Monolignol Biosynthesis Gene Families AT5G54160 42.000 8.96e-24 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212634g00001 - K22588 gmx:100779638 147.132