Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212620g00001 ATGGCGGATTGGAGTTCAAATCCACAGGATCTGAATTCCATGCATGAGGTAGGGCAATTGGAAGAGCAAATGGAGGATCTGAATTCCATACATGAGTTAGGGCAATTGGAAGAGCAAACGGAGGATCTGAATTCCATACATGAGTTAGGGCAATTGGAAGAGCAAACAGAGTTTTTGTGTAATGTTGATGAAGAGTACGTCCCCAAGGTTGGGATGACATTTATGTCGTGTACAGAAGCTAATGATTTCCATAAGGAGTGTGCTAAACGAGCTGGATTTGCTTTTAAAATCAGAAATTCACAAAGGAATAAAGAGACTGGTGCAATCAAGAATCAAATCTTCACATGTAACAGAGAGGGGAAAAGGAAATCTAACATACCTGAAGTGGAGAAGATGAATCCAATGTCTCCGGCAAATTGTCCTGCAAGGATGTTCGTACATTTTGAGAAGAAGACTCAACGTTATGTAATTTTCAAAGTTGTATTGGAGCATTCACATCCTTGA 504 0.4008 MADWSSNPQDLNSMHEVGQLEEQMEDLNSIHELGQLEEQTEDLNSIHELGQLEEQTEFLCNVDEEYVPKVGMTFMSCTEANDFHKECAKRAGFAFKIRNSQRNKETGAIKNQIFTCNREGKRKSNIPEVEKMNPMSPANCPARMFVHFEKKTQRYVIFKVVLEHSHP 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212620g00001 167 Pfam FAR1 DNA-binding domain 83 167 IPR004330 -
Stsc212620g00001 167 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 17 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212620g00001 Stsc-Chr212620 11807 12898 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc212620g00001 FAR1 8.6e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212620g00001 - K17604 adu:110280446 110.923