Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212598g00002 ATGCCTATAATCGACAAATTCAAAGACATGAGAACTGTTGTTATGGGAAAAGTGGAGTCTGGAACCGTTCGTGAGGGAGATTCCTTGTTGGTTATGCCAAATAAGGCTATTTTTACTGCGGGGTACAAGGCTATTTTGCACATCCACTCTGTTGTTGAAGAATGTGAGATTATTGAGCTCTTGCATCAAATTGATCCAAAAACAAGGAAACCTATGAAAAAGAAGGTTCTATTTGTGAAGAACGGTGCTAATGTTGTGTGCCGAATTCAGTTTAGTAGCATGATATGCCTTGAGAAGTTCTCTGATTTCCCACAACTTGGGAGATTTACTCTTCGCAGTGAAGGAAAAACTGTTGCTGTGGAGAAGATTACTGCTCTAGACATGTTTTTGAAACAGTTGGTTTTACTGAACGTTGGTTTTACCAGCCTTCCCATGCTTGATGTTCCATTGAAAGGAATAGTAGAATTTGAAGTGACGCAGGAATCAGGTGGCAACGGAAAGCGTGGACGTGGCAAGAAACGGGACCCAATAGCGTTAACGGAGTCCAGGCTGGATGATGTAGCTCTCCCAACCTCAAAACGACAACGTCTTGGACATCTTTAA 603 0.4212 MPIIDKFKDMRTVVMGKVESGTVREGDSLLVMPNKAIFTAGYKAILHIHSVVEECEIIELLHQIDPKTRKPMKKKVLFVKNGANVVCRIQFSSMICLEKFSDFPQLGRFTLRSEGKTVAVEKITALDMFLKQLVLLNVGFTSLPMLDVPLKGIVEFEVTQESGGNGKRGRGKKRDPIALTESRLDDVALPTSKRQRLGHL 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212598g00002 200 CDD eRF3_C_III 35 126 - -
Stsc212598g00002 200 SUPERFAMILY Translation proteins 1 39 IPR009000 -
Stsc212598g00002 200 Gene3D Translation factors 28 127 - -
Stsc212598g00002 200 Pfam Elongation factor Tu C-terminal domain 35 125 IPR004160 -
Stsc212598g00002 200 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 30 125 IPR009001 -
Stsc212598g00002 200 PANTHER TRANSLATION FACTOR 35 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212598g00002 Stsc-Chr212598 1702 9525 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212598g00002 29 124 Eukaryotic Initiation Factors Gene Family AT5G10630 31.250 2.94e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212598g00002 K03267 - thj:104813913 163.31