Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212597g00002 ATGGCCGATGATATACTGCAAATATTCTCCAATTTCGATGGAAGGTTCTCCAAGGAGAATTTAGCTGACAAGGTTGCAGACGGTGATCCCAGGGCCTGCGCCGCACTTGATCATTCCCTTAAGTCCCTTGACCGCCGGATCTCGCAATTTGTCTCATCCGACCGTCCGATCTGGGCCGACTCAGCCGATGCTGTTGCTTTTCTTGACGCCGTTGACGAGCTCGTCGCCGCAGTCGCCGAGTGGTCGCAACTCTCAACAGACAAGGCTTTCGGCGCGTGCCTCGCACGTGCTGAGGACATGCTGCAGCACGCCATGTTCCGACTTGAGGACGAGTTCCGATCTCTCATGGAGCGCGCTGGTGAGTCGTTCGAACTGACTCCGCCGTACCGAAACGGCGTCGAGTCGGTGGAGAATATCCCGTTCGATTCGGACGAAGAGGAGAACGAGCTGGAGGCGGTGGTGAACGACGGGGGAGAGGAGGACCAAATACCGGTGGCGCTGCCGTTGACGGACTACGACATCGTAATCGACGCGCTACCGGCGGGGACTATCAACGACCTGCACGAGATCGCGAGGCGCATGGTGGCGGGAGGATTTGGGAAAGAGTGCTCGCACGTGTACAGCAGCTGCCGGAGGGAATTCTTGGAGGAGAGTCTCTCGAGGTTAGGGTTGCAGAAGCTGAGCATCGAGGAGGTTCACAAGATGCCATGGCAGGACATCGAGGATGAGATTGAGAGGTGGATTAAGGCCTCCAACGTCTCCCTCAAGATCCTGTTCCCAAGTGAGAGAAGACTCTGCGACCGCGTGTTCTTTGGATTCTCCGCCGCTGCTGACCTTTCTTTCATGGAGGTCTGCCGTGGATCTGCTATTCAGCTTCTGAATTTCGCGGACGCTGTGGCTATCGGGAGCCGCTCGCCTGAACGGCTGTTTAGGATTCTCGACGTGTTTGAAACTTTGCGTGACCTAATTCCGGAATTTGAAGCCCTGTTCTCGGATCAGTACAGTGTTTCGCTCAGGAACGAGGCATTTACGATTTGGAAGAGGTTGGGGGAAGCAATCAGGGGAATTTTCATGGAGTTGGAGAATCTGATTCGAAGGGATCCCGCTAAGGTTGGGGTTCCCGGTGGTGGCCTACATCCGATCACACGCTATGTGATGAACTACCTGCGCGCCGCTTGCCGGTCACGGCAGACATTAGAGCAAGTTTTTGAAGACTATGGACATCCTTTGAAGGACTACCCTAAGCTTGATGATAGGGTTGCACCAAATTCTTCACTCTCTGTGCAAATGGATTGGATAATGGAGTTATTGGAGAGCAATTTGGAGGCAAAGTCCAAAGTCTACAATGACCCTGCATTGTCCTATGTCTTCTTGATGAACAATGGGAGGTACATTGTTCAGAAGGCGAAAGATAGCGAATTGGGAGCCCTCTTGGGCGACGATTGGATCCGAAAACACACTGCCAAAGTTAGGCAGTACCATGTGCATTACCAGAGGAGTTCATGGAACAAAGTTCTGGGGATTTTAAAGCTTGATGGTAGTAGTAATGGGTCAATGGGGCCTAATGGCACAGCAAAGACAATAAAAGAGAAACTGAAAATGTTCAACACACAGTTTGAGAATTTATGCAGGGTTCAGTCTTCTTGGTTTGTTTTTGATGAGCAGCTTAGGGAAGAAATAAGAATTGCCCTTGAGAAGATCTTATTGCCTGCATATGGAGGCTTCATTGGAAAGTTTCATACGGAACTTGGCAAGAATGCTGATAAGTACGTTAAGTATGGAGTAGAGGAAATTGAAGTAAAGCTCAACGATCTATTTCAGGGTAATAGTGGATCAACTGGTAGCCGAAAGTGA 1854 0.5086 MADDILQIFSNFDGRFSKENLADKVADGDPRACAALDHSLKSLDRRISQFVSSDRPIWADSADAVAFLDAVDELVAAVAEWSQLSTDKAFGACLARAEDMLQHAMFRLEDEFRSLMERAGESFELTPPYRNGVESVENIPFDSDEEENELEAVVNDGGEEDQIPVALPLTDYDIVIDALPAGTINDLHEIARRMVAGGFGKECSHVYSSCRREFLEESLSRLGLQKLSIEEVHKMPWQDIEDEIERWIKASNVSLKILFPSERRLCDRVFFGFSAAADLSFMEVCRGSAIQLLNFADAVAIGSRSPERLFRILDVFETLRDLIPEFEALFSDQYSVSLRNEAFTIWKRLGEAIRGIFMELENLIRRDPAKVGVPGGGLHPITRYVMNYLRAACRSRQTLEQVFEDYGHPLKDYPKLDDRVAPNSSLSVQMDWIMELLESNLEAKSKVYNDPALSYVFLMNNGRYIVQKAKDSELGALLGDDWIRKHTAKVRQYHVHYQRSSWNKVLGILKLDGSSNGSMGPNGTAKTIKEKLKMFNTQFENLCRVQSSWFVFDEQLREEIRIALEKILLPAYGGFIGKFHTELGKNADKYVKYGVEEIEVKLNDLFQGNSGSTGSRK 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212597g00002 617 Pfam Exo70 exocyst complex subunit 245 604 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc212597g00002 617 PANTHER EXOCYST COMPLEX PROTEIN EXO70 34 608 IPR004140 GO:0000145|GO:0006887
Stsc212597g00002 617 SUPERFAMILY Cullin repeat-like 58 606 IPR016159 -
Stsc212597g00002 617 Gene3D Exocyst complex component Exo70 57 616 - -
Stsc212597g00002 617 FunFam Exocyst subunit Exo70 family protein 50 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212597g00002 Stsc-Chr212597 2465 4318 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212597g00002 1 610 EXO70 exocyst subunit family AT5G58430 69.657 0.0 858
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212597g00002 K07195 - gsj:114376661 984.941