Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212597g00001 ATGTCACCACTGTATGTCCAAATTCCAAGATGGCTTATGCATCCAAAGCTATGGAGATTCCTTGGTTTTGCTTCATCCATAGTTGGAATTCTCTGTTATGCACTTAGTACATCCTTCAACCTTCTATTCGGAAAATGGAACTTGGTGAAAATCTCTATTTATGTTGTTTTCAGTTTCATAGTCTGCCTTGCCACTTTCTTTGCCAAGGTATGGAAACGCTCTGCGAGTCTCCGATTGAGAGCTCATATGGTGTTTTTAGTTCTGACCGTTACTTCTTTTTATTCGTTCTTTTTCGATAAAGCTGTGCACGGGAAATCGGATGCATATAGCATAGTTTCTTGTGCTTCTTTTGCCATCATGTGGTTTAGTTTGTCAAGACAAATTCACTGTGGATTTGAGGTAGACATGTTATATTTCTTTTTGGGACTTCTCATAATACAACTGATGAAGATAAAAATATTGTTGAGTATAGTTGCGATATGTTTTAGCTATTTCCTCATCATTCTTCAATCCTCTCTGGATGCACAGACAGTCACAGATGATGAATATTTGGAACTCCAGGATCAAAATCATGTGGCAATTCAAGTGGAATCTGATCCACAAGAATCCAATATTGATAGAGTCATCATGACAAAGCTCATGGATTGTGTTGAGGCACTTCAGCAGAGAAAATCTGCATTAGTGCAAACCCTTTTGATGGAATGCATCAATGCTACTAATAACTCTGGGTTGGTGACTGACTACAACCTCTTGCTTGATAATCTGCCACAGGGAGTTGTAAATAAACTTCATGAAGCTGTCAAATCCGCAGTGGGTGTTGGATTGGGGAAGGAGTGCTCTGATGCCTACATCAAATGCCGGAGGCAATTCTTGGAGGAGTGTCTAGCAAGATTGTTGGAGTTGCACACTATCAAACTTGACCACCCTGACACATTACCAACTCCATATTTTATGGTTAAGAGATGGGCTGAAACTAGCAATGTTGCTCTCAAAGTATTGTTTCCGTCCGAAAGACAACTATGCGATCGTGTCTTCTTTGGGCTACGTTCTGTTGCTGATGCTTGTTTTGCAGAGATTTGCCGGGATTCAACGACTCAGCTGTTAAATTTTGCGGATGCCTTTGCAAGTGATCCAAAATTCATCATAATCATTGACATTTTAGCAACATTGAGTGACCTGATTCCACATTTCCAATCATTATTCAGAACAGCCTCACCAAGTTCTTAG 1227 0.4002 MSPLYVQIPRWLMHPKLWRFLGFASSIVGILCYALSTSFNLLFGKWNLVKISIYVVFSFIVCLATFFAKVWKRSASLRLRAHMVFLVLTVTSFYSFFFDKAVHGKSDAYSIVSCASFAIMWFSLSRQIHCGFEVDMLYFFLGLLIIQLMKIKILLSIVAICFSYFLIILQSSLDAQTVTDDEYLELQDQNHVAIQVESDPQESNIDRVIMTKLMDCVEALQQRKSALVQTLLMECINATNNSGLVTDYNLLLDNLPQGVVNKLHEAVKSAVGVGLGKECSDAYIKCRRQFLEECLARLLELHTIKLDHPDTLPTPYFMVKRWAETSNVALKVLFPSERQLCDRVFFGLRSVADACFAEICRDSTTQLLNFADAFASDPKFIIIIDILATLSDLIPHFQSLFRTASPSS 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212597g00001 408 PANTHER EXOCYST COMPLEX PROTEIN EXO70 207 404 IPR004140 GO:0000145|GO:0006887
Stsc212597g00001 408 SUPERFAMILY Cullin repeat-like 244 402 IPR016159 -
Stsc212597g00001 408 Pfam Exo70 exocyst complex subunit 320 403 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc212597g00001 408 Gene3D Exocyst complex component Exo70 171 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212597g00001 Stsc-Chr212597 167 1393 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212597g00001 245 401 EXO70 exocyst subunit family AT5G58430 47.239 2.34e-44 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212597g00001 - - aip:107607033 620.542