Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212594g00001 ATGTGCGCATCACTCTCTTTCGTTTCTCCACTTCCTTTTGTAGCTGTAAGTGATTATAAGCAGTCTCTTCAGTTTCGGGACCTAAATGAGGAGAAGAGAAACATACGTTTGGAGAATGTAATTAGAGGTGGTAAAAGAGTTGAGATCTCAATCTATGACATTGTTGTTGGTGATGTCATACCCCTTAATATTGGTGACCAGGTCCCTGCTGATGGAATTTTGATTGTCGATCACTCTCTTGTAGTTGATGAATCGAGTATGACAGGGGAGAGCAATATTGTTGATAAGAATTCTAAGAACCCTTTTCTGATATCTGGTTGTAAAGTTGCAGATGGCAGTGGTGTTATGCTGGTAATCTGGCATGTTTGTGCAGTAATAAGTATGGAAGATGATGATGAAATTGTTTCTGAGACTCCTGTTCAAGCTTCTGGTAGTGTTGACTCAGGGAAAAAGTCTAATGTTTGGAGATTTTTTAAGAAGATTGGAAAAGATAGAGATGGCGTTGAAAAGGCATCATGCAACTTTTGTAATCGTGAATACTCAATTGGGAGGAACCCGAAAACTAATAATAGTTATGGGACTTCTCATTTGAGTCGTCATGTAGTTGCTTGCAAAGCTATCCCCCTTAGCGTTAGATTTGATGTGGATGGACCAGAAGGAACCCCAATCAAAATTGACTAG 681 0.395 MCASLSFVSPLPFVAVSDYKQSLQFRDLNEEKRNIRLENVIRGGKRVEISIYDIVVGDVIPLNIGDQVPADGILIVDHSLVVDESSMTGESNIVDKNSKNPFLISGCKVADGSGVMLVIWHVCAVISMEDDDEIVSETPVQASGSVDSGKKSNVWRFFKKIGKDRDGVEKASCNFCNREYSIGRNPKTNNSYGTSHLSRHVVACKAIPLSVRFDVDGPEGTPIKID 226
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc212594g00001 226 ProSiteProfiles Zinc finger BED-type profile. 149 211 IPR003656 GO:0003677
Stsc212594g00001 226 PANTHER CATION TRANSPORTING ATPASE 14 119 - -
Stsc212594g00001 226 Gene3D - 15 121 - -
Stsc212594g00001 226 SUPERFAMILY beta-beta-alpha zinc fingers 152 205 IPR036236 -
Stsc212594g00001 226 SUPERFAMILY Calcium ATPase, transduction domain A 39 120 IPR008250 -
Stsc212594g00001 226 Pfam E1-E2 ATPase 39 119 - -
Stsc212594g00001 226 Pfam BED zinc finger 152 202 IPR003656 GO:0003677
Stsc212594g00001 226 SMART bed5 149 207 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc212594g00001 Stsc-Chr212594 13222 14504 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212594g00001 4 141 Primary Pumps ATPases AT4G29900 64.865 1.86e-49 171
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212594g00001 K01537 - qsa:O6P43_002790 177.563