Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc212594g00001 | ATGTGCGCATCACTCTCTTTCGTTTCTCCACTTCCTTTTGTAGCTGTAAGTGATTATAAGCAGTCTCTTCAGTTTCGGGACCTAAATGAGGAGAAGAGAAACATACGTTTGGAGAATGTAATTAGAGGTGGTAAAAGAGTTGAGATCTCAATCTATGACATTGTTGTTGGTGATGTCATACCCCTTAATATTGGTGACCAGGTCCCTGCTGATGGAATTTTGATTGTCGATCACTCTCTTGTAGTTGATGAATCGAGTATGACAGGGGAGAGCAATATTGTTGATAAGAATTCTAAGAACCCTTTTCTGATATCTGGTTGTAAAGTTGCAGATGGCAGTGGTGTTATGCTGGTAATCTGGCATGTTTGTGCAGTAATAAGTATGGAAGATGATGATGAAATTGTTTCTGAGACTCCTGTTCAAGCTTCTGGTAGTGTTGACTCAGGGAAAAAGTCTAATGTTTGGAGATTTTTTAAGAAGATTGGAAAAGATAGAGATGGCGTTGAAAAGGCATCATGCAACTTTTGTAATCGTGAATACTCAATTGGGAGGAACCCGAAAACTAATAATAGTTATGGGACTTCTCATTTGAGTCGTCATGTAGTTGCTTGCAAAGCTATCCCCCTTAGCGTTAGATTTGATGTGGATGGACCAGAAGGAACCCCAATCAAAATTGACTAG | 681 | 0.395 | MCASLSFVSPLPFVAVSDYKQSLQFRDLNEEKRNIRLENVIRGGKRVEISIYDIVVGDVIPLNIGDQVPADGILIVDHSLVVDESSMTGESNIVDKNSKNPFLISGCKVADGSGVMLVIWHVCAVISMEDDDEIVSETPVQASGSVDSGKKSNVWRFFKKIGKDRDGVEKASCNFCNREYSIGRNPKTNNSYGTSHLSRHVVACKAIPLSVRFDVDGPEGTPIKID | 226 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc212594g00001 | 226 | ProSiteProfiles | Zinc finger BED-type profile. | 149 | 211 | IPR003656 | GO:0003677 | |
Stsc212594g00001 | 226 | PANTHER | CATION TRANSPORTING ATPASE | 14 | 119 | - | - | |
Stsc212594g00001 | 226 | Gene3D | - | 15 | 121 | - | - | |
Stsc212594g00001 | 226 | SUPERFAMILY | beta-beta-alpha zinc fingers | 152 | 205 | IPR036236 | - | |
Stsc212594g00001 | 226 | SUPERFAMILY | Calcium ATPase, transduction domain A | 39 | 120 | IPR008250 | - | |
Stsc212594g00001 | 226 | Pfam | E1-E2 ATPase | 39 | 119 | - | - | |
Stsc212594g00001 | 226 | Pfam | BED zinc finger | 152 | 202 | IPR003656 | GO:0003677 | |
Stsc212594g00001 | 226 | SMART | bed5 | 149 | 207 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc212594g00001 | Stsc-Chr212594 | 13222 | 14504 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc212594g00001 | 4 | 141 | Primary Pumps ATPases | AT4G29900 | 64.865 | 1.86e-49 | 171 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc212594g00001 | K01537 | - | qsa:O6P43_002790 | 177.563 |