Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212556g00003 ATGGCTAATAAATTTCAGGGTGATCAACTTATAATTGGAAATTTAGGAGATTCTCGTGCAATTCTTTGTACAAGAGAGAGATATCAACTTATTCCTATTCAACTTACTGTTGATTTGAAACCAGATCTTCCAAGTGAAGCTACAAGGATCGTGAACTGTGAAGGAAGAGTTTTCGCTGCAGAGGAAGAACCGGATGTTTGCCGAATATGGATGCCTGATGATGACTGTCCCGGATTAGCTATGTCGAGATCCTTCGGAGACTTTTGCCTTAAAGATTATGGACTCATCTCAATTCCTGATGTATTTTACAGGAAACTCTCCAAGCAAGATGAATTTGTGGTCTTGGTAAGTGATGGGATATGGGATGTGCTTACTAACAATGAAGTTATCAACATAATTGCTTCAGCACCAAACAGAGGCATAGCAGCTAAATTGCTTGTAAAGAAAGCTGTTAGAGCATGGAGATACATATATCTTGGCTCCAAGGTAGACGATTGCATGGTCGTATGCTTGTTTCTGGATGATGAGCAACCAGTCTTATCCCACTCGCACTCAAAGAATATTGGTAAACATCCCAGCAAACACATTCATCGCAACTGA 600 0.4017 MANKFQGDQLIIGNLGDSRAILCTRERYQLIPIQLTVDLKPDLPSEATRIVNCEGRVFAAEEEPDVCRIWMPDDDCPGLAMSRSFGDFCLKDYGLISIPDVFYRKLSKQDEFVVLVSDGIWDVLTNNEVINIIASAPNRGIAAKLLVKKAVRAWRYIYLGSKVDDCMVVCLFLDDEQPVLSHSHSKNIGKHPSKHIHRN 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212556g00003 199 Pfam Protein phosphatase 2C 6 150 IPR001932 -
Stsc212556g00003 199 Gene3D - 2 175 IPR036457 -
Stsc212556g00003 199 SUPERFAMILY PP2C-like 5 175 IPR036457 -
Stsc212556g00003 199 CDD PP2Cc 5 173 IPR001932 -
Stsc212556g00003 199 ProSiteProfiles PPM-type phosphatase domain profile. 1 173 IPR001932 -
Stsc212556g00003 199 PANTHER PROTEIN PHOSPHATASE 9 171 IPR015655 GO:0004722|GO:0006470
Stsc212556g00003 199 SMART PP2C_4 1 171 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212556g00003 Stsc-Chr212556 5401 6278 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212556g00003 6 195 PP2C-type Phosphatase Gene Family AT1G79630 57.068 2.25e-78 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212556g00003 - - gmx:100783603 314.309