Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212514g00005 ATGGCTGAAATAGCTCGCGGGGCACATCAACCTTCCATTCTACCTGTCTGGGCCAGGGACCTCTTATGCGCAAGGGATCCACCTCGCATTACATGCAACCATCGCGAATATGAAGAAGCCATAGACACCGCCACCACCTCCATGAAGAACAAGAAAGACATGGTTCAACGCTCCTTCTTCTTTGGACCAACCGAAATAGCTTCCCTTCGTCGTCTGGTTCCACGTCACCTTGGCCACTGCACTCGATTTGAGCTTATAACTGCATGTCTATGGTGTTGCCGTACAAAAGCATTGCAACTTGCACCAGAAGATGAAGTTCGCATGATGTGCATGGTGAACGCACTTAATAGGTTTAACAACCCTAAGATTCCAATTGGTTACTACGGAAACGTTATTGCTTATCCAGCGGCAGTTACAACTGTAAAGAAGCTTTGTGAGAATCCGTTTGGATATTCTGTTGAGTTGATAAAGAAAGCAAAAGCTGAGGTGACTGAAGAGTACGTTCGTTCTGTGGCAGATCTAATGGTCACAAAAGGACGACCGTTATTTACAACCGTTGGATCTTGCATCGTGTCAAACTTGACGCGTGCTGGGTTTAGAGAAGTGGATTATGGATGGGGTAAGGCATTGTACGGAGGAGTATCTGAAGGTGGGGTTGCGGATTTTTTTGGAGTAACATTTATCATGGATTGTGAGAATGCCAAACGAGAAGAAGGTGTAATGTTTCCACTTTTCTTGCCGGCTAAAGCTATGGAGAGGTTTGAGAAAGAGTTGGGTGATATGCTTTGCAAGAGTGATAATGCATATCTCACATCCATAAGATCTTCCTTGTAG 834 0.4508 MAEIARGAHQPSILPVWARDLLCARDPPRITCNHREYEEAIDTATTSMKNKKDMVQRSFFFGPTEIASLRRLVPRHLGHCTRFELITACLWCCRTKALQLAPEDEVRMMCMVNALNRFNNPKIPIGYYGNVIAYPAAVTTVKKLCENPFGYSVELIKKAKAEVTEEYVRSVADLMVTKGRPLFTTVGSCIVSNLTRAGFREVDYGWGKALYGGVSEGGVADFFGVTFIMDCENAKREEGVMFPLFLPAKAMERFEKELGDMLCKSDNAYLTSIRSSL 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212514g00005 277 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 2 256 - -
Stsc212514g00005 277 Pfam Transferase family 2 258 - -
Stsc212514g00005 277 Gene3D - 36 258 IPR023213 -
Stsc212514g00005 277 Gene3D - 1 35 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212514g00005 Stsc-Chr212514 18925 19890 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212514g00005 2 258 Monolignol Biosynthesis Gene Families AT5G48930 23.358 5.29e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212514g00005 K19861 - var:108341556 345.51