Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212514g00003 ATGACTTCATTATCATCGTTTCCCTCTCTACTCTTTACAGTCCAAAGGCGCCAACCGGAGCTAGTGGCTCCGGCTACACCCACTCCCCACGAAGTTAAACCATTATCTGACATATATGATCAAGAAGGGCTCCGTTTCCATATTCCACTGTTTCATGTTTATCAGCACAAGGCGTCTATGGAAGGAAAAGATCCAGTTAAGGTTATAAGAGATGCACTCTCAAGAACACTTGTGTTTTATTATCCATTTGCAGGCAGGATAAGAGAGCGTCATGGCCGCAAGTTGGTGGTGGATTGCACCGGGGAGGGTGCCTTGTTTATTGAAGCAGATGCTGGTGTAACACTTGATCAACTTCGTGGCTCTCTTCAACCTCCATTCCCGTGTTCCCAAGAACTCCTTTATAATGTTCCAGGCTCTGATGGAATTATCAACTGCCCCCTTCTACTCATACAGGTTCAAAATATTAAAGACAATCTTTGTTAG 483 0.4451 MTSLSSFPSLLFTVQRRQPELVAPATPTPHEVKPLSDIYDQEGLRFHIPLFHVYQHKASMEGKDPVKVIRDALSRTLVFYYPFAGRIRERHGRKLVVDCTGEGALFIEADAGVTLDQLRGSLQPPFPCSQELLYNVPGSDGIINCPLLLIQVQNIKDNLC 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212514g00003 160 Pfam Transferase family 14 156 - -
Stsc212514g00003 160 PANTHER ACYL TRANSFERASE 4 12 152 - -
Stsc212514g00003 160 Gene3D - 13 160 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212514g00003 Stsc-Chr212514 10904 11386 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212514g00003 14 156 Monolignol Biosynthesis Gene Families AT5G48930 34.965 5.95e-16 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212514g00003 K19861 - cave:132187918 225.713