Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212514g00001 ATGACTTCATTACCATCGTTTCCCTCTATAGTCTTTACAGTCCAAAGGCGCCAACCGGAGCTAGTGGCTCCGGCTACACCCACTCCGCACGAAGTTAAACCATTATCTGACATAGATGATCAAGAAGGGCTCCGTTTCCATATTCCAATGTTTCATGTTTATCAGCACAAGGCGTCTATGGAAGGAAAAGATCCAGTTAAGGTTATAAGAGATGCACTCTCAAGAACACTTGTGTTTTATTATCCATTTGCAGGCAGGATAAGAGAGCGTCATGGCCGCAAGTTGGTGGTGGATTGCACCGGGGAGGGTGCCTTGTTTATTGAAGCAGATGCTGGTGTAACACTTGATCAACTTCGTGGCTCTCTTCAACCTCCATTCCCGTGTTCCCAAGAACTCCTTTATAATGTTCCAGGCTCTGATGGAATTATCAACTGCCCCCTTCTACTCATACAG 453 0.4592 MTSLPSFPSIVFTVQRRQPELVAPATPTPHEVKPLSDIDDQEGLRFHIPMFHVYQHKASMEGKDPVKVIRDALSRTLVFYYPFAGRIRERHGRKLVVDCTGEGALFIEADAGVTLDQLRGSLQPPFPCSQELLYNVPGSDGIINCPLLLIQ 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212514g00001 151 PANTHER ACYL TRANSFERASE 4 12 126 - -
Stsc212514g00001 151 Gene3D - 13 151 IPR023213 -
Stsc212514g00001 151 Pfam Transferase family 14 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212514g00001 Stsc-Chr212514 9 461 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212514g00001 14 151 Monolignol Biosynthesis Gene Families AT5G48930 34.783 2.27e-15 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212514g00001 K19861 - cave:132187918 225.328