Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212502g00003 ATGGAAGTGGCTAAAAAGGGCGAGAGGAACTATGCGAAGAAAAGCTTGGAGGCCAATTATGCAGCCTGTGCGTACACATCCATGAAGCTCAAGAAAGCCACTGAACAAATAGATGTGTATAGCTTTGGTGTTGTATTGCTAGAGCTAGTGAGTGGAAGACAAGCTGAGAAAGCAGATTCAAGTGAGTCCATTATTGACATAGTGAAGTGGGTTAGAAGGAAAGTGAACATTGCTAATGGGGTGCAACAAATTCTTGAGAAAAGAATGTCAAGCACATGCCACCAAGAAATCGTTAGAGCCTTAGACATTGCACTCCGTTGCACCTCAGTCGTTGCTAAGAAGAGGCCATCAATGGTGGAAGTTGTCAAGTCTCTTCAGTCCCTTGAGTTAAGGACTTGCATTGTAGATTTGCAAGATCAGCTACCAAATGAGGAACTCTCCAATATTCCAATATGA 456 0.4298 MEVAKKGERNYAKKSLEANYAACAYTSMKLKKATEQIDVYSFGVVLLELVSGRQAEKADSSESIIDIVKWVRRKVNIANGVQQILEKRMSSTCHQEIVRALDIALRCTSVVAKKRPSMVEVVKSLQSLELRTCIVDLQDQLPNEELSNIPI 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212502g00003 151 Gene3D Transferase(Phosphotransferase) domain 1 3 140 - -
Stsc212502g00003 151 Pfam Protein tyrosine and serine/threonine kinase 8 125 IPR001245 GO:0004672|GO:0006468
Stsc212502g00003 151 SUPERFAMILY Protein kinase-like (PK-like) 31 125 IPR011009 -
Stsc212502g00003 151 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 31 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212502g00003 Stsc-Chr212502 19584 20957 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212502g00003 16 128 Receptor kinase-like Gene Family AT5G06940 51.261 2.45e-30 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Stsc212502g00003 PK_Tyr_Ser-Thr 7.4e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212502g00003 - - adu:107492922 204.912