Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212490g00004 ATGTTCAGATCATTGTTACTCTTCATATTCCTGGCCCTTATAGTCACAAATTCAAAGGCTATCATGGTTCAAAAGACCTACATTGTTCACATGGACAGAACCAAAATTAGAGCCTCCATTCACTCTCAAGACATCACAAAACCATGGTTTGAATCAGTCCTTGATTTCATTTCTGAATCTTCAACACAAGAACAACAAGAAGAGATTCTACCTCCTCAGCTTCTCTATGCATATGAAACAAACATGTTTGGCTTCGCGGCTTGCCTTTCGCCGAAACAACTCGAATCCTTGAGCCTAGTTGATGGATTCCTTTCAGCCATGCCTGATGAACTATTAACACTTCACACAACACACACTCCAAATTTTCTTGGCCTAAAGAGTGGAATTGGCCTTTGGAGTGCTCAAAACTTGGCCTCAGATGTAATAATCGGCATCATTGATTCAGGAATTTGGCCAGAACACATCAGTTTCAAAGATTCAGGCTTGTCCTCTGTACCTTCTCATTGGAAAGGTATTTGTGAAGAGGGCACAAAATTCTCTGCTTCAAATTGCAACAAGAAGCTTATTGGTGCAAGGACTTATCTCAAAGGGTACGAAAAATCCGTCGCAAAGATCAACCTCACGACGGATTATCGTTCCCCTAGAGACTCCATTGGCCATGGAACACACACTGCTTCGACCGCAGCTGGTTCCATGGTGAAGAATGCAAGCTTCTATGGCCTTGCTAGTGGTTCAGCAATTGGAATGAGGCAAACTTCAAGAATTGCAGCCTATAAAGCTTGTTGGCCTGGTGGCTGTGTTACTTCAGACATACTTGCTGCCATGGATCAAGCAGTTTCTGATGGAGTTGATGTGTTATCACTCTCTTTAGGTGGATTTCCGAAGCCTTACTATATCGATGCTATCGCCATAGCCTCATTTGGTGCTGCAAAAAATGGTGTTTTTGTTTCTTGCTCTGCAGGTAACTATGGACCTCACCCTTCTACCGTTGGAAATAGTGCACCTTGGATCATGACAGTTGCAGCCAGCTACACTGACAGGACTTTTCCAACGAAAGTAAGGCTCGGCGGCGGCGAAGTCTTCCGAGGATCTTCGCTTTACCAAGGAAGAAAAACAGGTCAATTGCCTCTTGCTTATGCAAAATCAGCAGGTGCTAATAAAGAAGCACAATACTGCACAGAACACTCACTTGATCAAAGCCTTGTTAAGGGCAAAATTGTTGCTTGTGAAAAAGGACTAAACAGCAGAACTGAGAAGGGAATGGTGGTTAAAAAAGCCGGCGGCGCCGGAATGATTCTACTCAACTCAGATAGCCAAGGAGATGAGCTTCTTGCTGATTCTCACATATTGCCAGCAACTTCATTAGGTTTCTCAGAAAGTAACATTGTTAGAAACTATATCCAAACTTCTAGAGCTACACCAACAGCTTCAATTTCCTTCCTAGGGACAAAGTATGGCGAGCCTGCGCCCGCGGTCGCGGCGTTTTCTTCTAGAGGGCCAAACTATTTTGGACTGGATGTGATTAAACCGGATGTTACTGCACCCGGTGTGAACATCTTGGCGGCGTGGCCGGCGAAAACTAGCCCCAGTTTGCTGAAAAATGACCAAAGAAGTGTTGCTTTTAACATTGTTTCAGGCACTTCAATGTCATGTCCTCATGTTAGTGGCGTAGCTGCATTGATCAAATCTGTTCATAGAGATTGGTCTCCTGCAGCCATAAAATCTGCACTGATGACTACTGCATACACATTGAACAATAAAGGCGATCCGGTTGCAGATACCGGATCGAATAATTCTACTTTTGCTACTCCTTTTGCTTTTGGTTCTGGCCATGTTAACCCAGAAAGTGCATCTGATCCAGGTTTAGTATATGATATAAGCACAAAAGATTATTTGAATTACTTATGTAGCCTTAACTATACAGATTCTGAGATTGCTTTGGTGTCAAGAAAGACTTTTGTGTGTCCTAAGAATTCAGCTCTTCAGGTTGGTGACTTGAATTACCCTTCATTTTCTGTTCTATTTGATAGATTGGTGCAAAATTATAGTGTGACATACAAGAGGGTTGTCACAAATGTTGGAAAATCAGAGAGTGCTAATTATTATGTGGTTAGTGTTGAACAGCCAAGTGGAGTTTCAGTTAATGTTGAACCAAGGAAACTGAAATTTGAGAAAATTGGACAGAAATTGAGGTACAGTGTGACATTTTCTTCAATTGGAAACAGATTAAGAGTTGCTGGTTCCAATTCATTTGGATCATTGAGTTGGGTTTCTGGGGAATATTACAAGGTTAGAAGTCCTATTGCTGTAACATGGCAATAG 2322 0.422 MFRSLLLFIFLALIVTNSKAIMVQKTYIVHMDRTKIRASIHSQDITKPWFESVLDFISESSTQEQQEEILPPQLLYAYETNMFGFAACLSPKQLESLSLVDGFLSAMPDELLTLHTTHTPNFLGLKSGIGLWSAQNLASDVIIGIIDSGIWPEHISFKDSGLSSVPSHWKGICEEGTKFSASNCNKKLIGARTYLKGYEKSVAKINLTTDYRSPRDSIGHGTHTASTAAGSMVKNASFYGLASGSAIGMRQTSRIAAYKACWPGGCVTSDILAAMDQAVSDGVDVLSLSLGGFPKPYYIDAIAIASFGAAKNGVFVSCSAGNYGPHPSTVGNSAPWIMTVAASYTDRTFPTKVRLGGGEVFRGSSLYQGRKTGQLPLAYAKSAGANKEAQYCTEHSLDQSLVKGKIVACEKGLNSRTEKGMVVKKAGGAGMILLNSDSQGDELLADSHILPATSLGFSESNIVRNYIQTSRATPTASISFLGTKYGEPAPAVAAFSSRGPNYFGLDVIKPDVTAPGVNILAAWPAKTSPSLLKNDQRSVAFNIVSGTSMSCPHVSGVAALIKSVHRDWSPAAIKSALMTTAYTLNNKGDPVADTGSNNSTFATPFAFGSGHVNPESASDPGLVYDISTKDYLNYLCSLNYTDSEIALVSRKTFVCPKNSALQVGDLNYPSFSVLFDRLVQNYSVTYKRVVTNVGKSESANYYVVSVEQPSGVSVNVEPRKLKFEKIGQKLRYSVTFSSIGNRLRVAGSNSFGSLSWVSGEYYKVRSPIAVTWQ 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212490g00004 773 Pfam Fibronectin type-III domain 665 770 IPR041469 -
Stsc212490g00004 773 Gene3D Peptidase S8/S53 domain 140 631 IPR036852 GO:0004252|GO:0006508
Stsc212490g00004 773 ProSitePatterns Serine proteases, subtilase family, serine active site. 546 556 IPR023828 -
Stsc212490g00004 773 Gene3D - 635 772 - -
Stsc212490g00004 773 FunFam Subtilisin-like protease SBT1.5 635 773 - -
Stsc212490g00004 773 SUPERFAMILY Subtilisin-like 114 622 IPR036852 GO:0004252|GO:0006508
Stsc212490g00004 773 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 115 IPR037045 -
Stsc212490g00004 773 FunFam subtilisin-like protease SBT1.5 346 485 - -
Stsc212490g00004 773 FunFam Subtilisin-like protease SBT1.5 140 356 - -
Stsc212490g00004 773 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Stsc212490g00004 773 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Stsc212490g00004 773 PRINTS Subtilisin serine protease family (S8) signature 545 561 IPR015500 -
Stsc212490g00004 773 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 770 IPR045051 -
Stsc212490g00004 773 ProSiteProfiles Serine proteases, subtilase domain profile. 122 618 - -
Stsc212490g00004 773 CDD Peptidases_S8_3 112 582 IPR034197 -
Stsc212490g00004 773 Pfam Subtilase family 139 589 IPR000209 GO:0006508|GO:0008236
Stsc212490g00004 773 Gene3D - 346 485 - -
Stsc212490g00004 773 Pfam Peptidase inhibitor I9 26 115 IPR010259 -
Stsc212490g00004 773 CDD PA_subtilisin_like 353 478 - -
Stsc212490g00004 773 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 143 154 IPR023827 -
Stsc212490g00004 773 Pfam PA domain 376 459 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212490g00004 Stsc-Chr212490 18444 20875 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212490g00004 24 773 Subtilisin-like Serine Gene Family AT1G01900 53.723 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212490g00004 - - ahf:112797343 1353.96