Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212490g00003 ATGGAAATTGCTCTGAAGATTGCTGAAAAGATAAAAGCACATGAAAGATTCGCAGTGTATATTGTTATTCCAATGTGGCCAGAAGGAGTTCCAACCGGGGCTGCTACACAAAGGATTCTGTTTTGGCAGAATAATACAATGCAAATGATGTATGACACTGTTTACAAGGCTTTGGTTGAGGCTGGGGTTGAAGCAGCATTCTCTCCACAAGACTTTTTGAACTTCTTCTGTCTAGGAAATCGGGAGGCCATGAGTGCTTATGATAATGTCACGGTCTCTGGAACTCCTCCCCCAGCAAATAGTACCCAAGCAAATAGTCGAAATAGTCGGCGTTTCATGATTTATGTTCATTCTAAAGGGATGATAGTTGATGATGAATATGTGATATTGGGATCCGCAAACATCAATCAACGCTCTATGGAAGGAACAAGAGACAGTGAGATTGCAATGGGAGCCTATCAACCACATTATACCTGGGCAAGAAAATCTACTTACCCTGGTGGACAAGTCCATGGATATAGGATGTCGCTTTGGGCAGAACACACAGGAACAATTGAAGATTGTTTCTTGCAGCCAGAGAGCCTTGAATGCGTGCGAAGGATTAGAGCGATGGGTGAAATGAACTGGCGACAATATGCAGCAAGTGAAGTGACAGAGATGAGAGGGCATCTAATGAAATACCCTGTTGATGTTGATAGAAAGGGCAAAGTTAGACCTCTTCCTGGCCATGAAGAGTTCCCTGATGTTGGAGGGAAAATAGTTGGGTCATTCCTTGCCATGAAGGAGAATCTAACCATTTGA 801 0.432 MEIALKIAEKIKAHERFAVYIVIPMWPEGVPTGAATQRILFWQNNTMQMMYDTVYKALVEAGVEAAFSPQDFLNFFCLGNREAMSAYDNVTVSGTPPPANSTQANSRNSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDSEIAMGAYQPHYTWARKSTYPGGQVHGYRMSLWAEHTGTIEDCFLQPESLECVRRIRAMGEMNWRQYAASEVTEMRGHLMKYPVDVDRKGKVRPLPGHEEFPDVGGKIVGSFLAMKENLTI 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212490g00003 266 SMART pld_4 112 139 IPR001736 GO:0003824
Stsc212490g00003 266 Gene3D Endonuclease Chain A 1 165 - -
Stsc212490g00003 266 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 112 139 IPR001736 GO:0003824
Stsc212490g00003 266 PANTHER PHOSPHOLIPASE D 1 257 IPR015679 -
Stsc212490g00003 266 Pfam Phospholipase D Active site motif 113 139 IPR001736 GO:0003824
Stsc212490g00003 266 SUPERFAMILY Phospholipase D/nuclease 3 198 - -
Stsc212490g00003 266 Pfam Phospholipase D C terminal 186 256 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212490g00003 Stsc-Chr212490 10215 12051 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212490g00003 1 266 Phospholipase D Gene Family (Wang group) AT2G42010 68.942 5.15e-144 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212490g00003 K01115 - lja:Lj0g3v0363499.1 492.271