Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212484g00002 ATGGTGAGCATCCAATCTTCCTACACAGTCACCCCTTCAGAGCCCACGCCCGATGTGAGACTCTTCTCTCTCTGCGAGCAAATCAAGCTTCGCACCCACGCCCCCTCCTTCTACGCCTACAAACCCACCAACTTCGACAAAATCAACATCCACAACCTCAGAGACGCTCTCAGCAAGGCCCTCTCCATCTACTACCCTATCGCCGGCAGGCTCTGCTGGACGCACGGTGGTAGATGGGAGCTCCATTGCAACGCCAAAGGAGCCTTGCTTATTGAAGCTTCCTGCAAAGGGAAGACACTAGACGATCTTGGAGACTTTGTCCCCAACGGTTTAGTCACTCAACTCATCCCCAACATCGATTACACCGCTCCGCTCGAAGAAACCCCGATCTTGGCCGTTCAGCTCACCCGCTTCAGCTGCGGCGGCGTCACCGTCGGCGTTGCCATGTGCCGCGGTGCACTCGACGGAACCGGCGGCATGCGCTTCATCAACACTTGGGCAAAGTTGGCCAGAGGGGAGCCTCTAGACGAATCTGACCAGTATCCTTGTCATGATCGTACCGAGCTAAATTCGCGTAAGATCACGACAATGGGTTCCGGGTTCCCTACTCATGGCCAGAACGGTCATTCCGATCATTCTGACCATGACCATTCAGAGTACGGAGCCCCGCCCCCTTGGTTAGGTTCATTAGGAACCGAAGACGCCAAGGTGGCTGTCGAAGTCATGAAGCTAACAGGAGAGCAAGTAAAGAAACTGAAAATGAAAGCGACGTCTACAAACGTCACGTCCGTCGATAACGGTAACGGTGAAATGACCAAACCGTTCTCGAGTTTCGAGTCTATTGCCGGACACTTATGGAGGTCTGTTAGTAAAGCGAGATACCAAGGAAACAATTCACAGCCAACGAGGCTAACCACTTTGGTTAACTGCAGGAACCGTCTGAAGCCGCCGCTTCCCCCTGTCTACGCGGGGAACGCGGCTTTCCCCACGGCGACGCCCACCCTCACCTTTGGCGACCTGATGGAGAATCCCGTGGGATTCGCGGCCGCCAAGGTAAAGGGGGCGATCGCGAAGGTGGACGACGCGTTCGTCAGATCGGCTCTTGAATACATCGATAATGTGAAAGACATGAACTTGGTGAGGTACAATTTTCACTACCCTGCCAAGAGTGTCCATAAGGGGGCTTGGAAAGGGAACCCAAACTTGTTCGTAGTGAGTTGGATGAACTTCACATATGACCATGCTGATTTTGGTTGGGGTGTGCCTTATTATTTTGGACCTGTGTATATGGATGCTGAAGGGAAAGCGTTTTGTCTTAACAAGCCTAATGGTGATGGAACGGTTCATGTAGCTATCGCTTTGGACTCAGCTCACATGCCTGCTTTCAAGAAAATCTTCTATGACGACATAGATTAG 1416 0.5247 MVSIQSSYTVTPSEPTPDVRLFSLCEQIKLRTHAPSFYAYKPTNFDKINIHNLRDALSKALSIYYPIAGRLCWTHGGRWELHCNAKGALLIEASCKGKTLDDLGDFVPNGLVTQLIPNIDYTAPLEETPILAVQLTRFSCGGVTVGVAMCRGALDGTGGMRFINTWAKLARGEPLDESDQYPCHDRTELNSRKITTMGSGFPTHGQNGHSDHSDHDHSEYGAPPPWLGSLGTEDAKVAVEVMKLTGEQVKKLKMKATSTNVTSVDNGNGEMTKPFSSFESIAGHLWRSVSKARYQGNNSQPTRLTTLVNCRNRLKPPLPPVYAGNAAFPTATPTLTFGDLMENPVGFAAAKVKGAIAKVDDAFVRSALEYIDNVKDMNLVRYNFHYPAKSVHKGAWKGNPNLFVVSWMNFTYDHADFGWGVPYYFGPVYMDAEGKAFCLNKPNGDGTVHVAIALDSAHMPAFKKIFYDDID 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212484g00002 471 Gene3D - 231 469 IPR023213 -
Stsc212484g00002 471 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 466 - -
Stsc212484g00002 471 MobiDBLite consensus disorder prediction 197 224 - -
Stsc212484g00002 471 Gene3D - 1 199 IPR023213 -
Stsc212484g00002 471 Pfam Transferase family 1 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212484g00002 Stsc-Chr212484 4779 6649 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212484g00002 2 468 Monolignol Biosynthesis Gene Families AT5G48930 37.712 1.22e-87 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212484g00002 K13065 - gmx:100775549 567.77