Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212438g00004 ATGGGATCAAATAAAGTAGCAGTAATTGGTGCAGTTTTAGCTATGCTAGCAATTCTTCAATTAGCAGAAGCACAGACACAACATGTAGTTGGAGGCAGTGAGGGTTGGAAGATTCCATCAAATGATTCCACATATCAAGATTGGGCAAATAACCAGAATTTTTCAGTCGGAGATATCTTAGTGTTCAATTTCGTTACAAACCAACATGATGTGGTTGAAGTGCCAAAAGATTCCTACGACATTTGCAGTCCAGAATTTGCCATGAACACAACAATAATGAAAGGACCTGCACACTTAACCCTTAACAGCTCTGGCCAATTTTACTATATTTGCAGCTTTGGTACACATTGCATTCAAGGACAGAAGTTGGCTATTATTGTCTCTAACTCCTCCTCCTCCTCCTTGGCCCCTTCTCCACAGTCATCTTGGTCACCGGCGGTGGTTACTACTACTCCCACCGCCGCTGCTGCTTTCTCCTTGATTTTCATCTTCTCATTCATATAA 504 0.4187 MGSNKVAVIGAVLAMLAILQLAEAQTQHVVGGSEGWKIPSNDSTYQDWANNQNFSVGDILVFNFVTNQHDVVEVPKDSYDICSPEFAMNTTIMKGPAHLTLNSSGQFYYICSFGTHCIQGQKLAIIVSNSSSSSLAPSPQSSWSPAVVTTTPTAAAAFSLIFIFSFI 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212438g00004 167 PANTHER BLUE COPPER PROTEIN 26 136 IPR039391 GO:0009055
Stsc212438g00004 167 SUPERFAMILY Cupredoxins 26 128 IPR008972 -
Stsc212438g00004 167 Gene3D - 25 139 IPR008972 -
Stsc212438g00004 167 ProSitePatterns Type-1 copper (blue) proteins signature. 105 121 IPR028871 -
Stsc212438g00004 167 ProSiteProfiles Phytocyanin domain profile. 26 129 IPR003245 GO:0009055
Stsc212438g00004 167 FunFam Cupredoxin superfamily protein 25 133 - -
Stsc212438g00004 167 Pfam Plastocyanin-like domain 36 121 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212438g00004 Stsc-Chr212438 13646 14789 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212438g00004 11 157 Phytocyanin Superfamily AT2G25060 33.333 2.80e-22 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212438g00004 - - adu:107472880 213.001