Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212406g00001 ATGGATCATGAAAATGTGATAGCCCTTAAAGACATTATAAGACCACCACAGAGGGAGAACTTCAATGATGTGTATGTTGTTTATGAGTTGATGGATACTGATCTGCATCAAATCATTCGGTCGAATCAACCATTGACCGATGATCATTGTCGGTATTTTTTGTATCAGTTGTTACGAGGACTCAAATATGTACATTCAGCGAATGTCTTACACCGTGATCTAAAGCCTAGCAACTTGCTACTGAATGCAAATTGTGACCTTAAGATCGGAGACTTTGGGCTTGCTAGAACTACATCTGAAACTGATTTTATGACCGAATATGTGGTCACTCGGTGGTACCGAGCTCCAGAATTGCTTCTTAATTGTTCGGAATATACTGCAGCAATTGATATATGGTCTGTTGGTTGCATCCTCGGTGAAATCATGACCAGACAACCCCTCTTTCCCGGAAAAGATTACGTTCATCAGCTGAGACTGATCACAGAGCTCATAGGTTCACCTGATGACACCAGCCTTGGATTTCTGCGGAGTGATAACGCTCGTAGATATGTAAGACAGCTTCCACAATATCCAAGGCAGCAATTCGCTGCTAGATTTCCAAACATGTCTCCTGGCGCCGTCGATTTGTTAGAAAGGATGCTTGTATTTGATCCAAACAGGCGCATTACAGTTGATGAGGCATTGTCTCACCCGTACCTGGCACCGCTTCACGATATTAACGAGGAGCCTGTTTGCTCGAGACCTTTCAGTTTTGATTTTGAGCAACCATCAGTCACTGAAGAAGACATCAAGGAACTCATCTGGAGAGAATCTGTGATGTTCAATCCTGATCCACCAATTTATTGA 846 0.4279 MDHENVIALKDIIRPPQRENFNDVYVVYELMDTDLHQIIRSNQPLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDDTSLGFLRSDNARRYVRQLPQYPRQQFAARFPNMSPGAVDLLERMLVFDPNRRITVDEALSHPYLAPLHDINEEPVCSRPFSFDFEQPSVTEEDIKELIWRESVMFNPDPPIY 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212406g00001 281 FunFam Mitogen-activated protein kinase 31 260 - -
Stsc212406g00001 281 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 2 234 - -
Stsc212406g00001 281 ProSitePatterns Serine/Threonine protein kinases active-site signature. 69 81 IPR008271 GO:0004672|GO:0006468
Stsc212406g00001 281 Gene3D Transferase(Phosphotransferase) domain 1 33 254 - -
Stsc212406g00001 281 ProSiteProfiles Protein kinase domain profile. 1 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc212406g00001 281 Gene3D Phosphorylase Kinase; domain 1 1 276 - -
Stsc212406g00001 281 SMART serkin_6 2 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc212406g00001 281 Pfam Protein kinase domain 1 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc212406g00001 281 SUPERFAMILY Protein kinase-like (PK-like) 2 240 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212406g00001 Stsc-Chr212406 389 3214 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212406g00001 1 276 MAP Kinase Gene Family AT4G01370 92.029 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Stsc212406g00001 Pkinase 6.5e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212406g00001 K20600 - gmx:100815697 556.214