Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212385g00003 TTCATTGGCATATCAGAGGCCAACACGTGGGAAGTGGACCCAGCCTGTCCCCAGTCTTCCGGTCCCTACTATCCGGAGGTTAAGATTGGTGACTTGAGTTTGGCAACAATTGTGGGAAGGAGCCACTCTGCGCATTCCGTTCTCGGGACACCGGAATTCATGGCGTCGGAGTTGTACGAGAAGTACACGGAAATGGTGGACATATACTCATTTGGGATGTGTGTGTTAGAAATGGTGACACTAGAGATTCCATATAGTGAGTGTGACAATGTTGTGAAGGTGTACAAGAAAGTGTGTTCAGGTGTGAGGCCTCAGTCACTCAAAAAGATTAAGGATGCTGAGGTGAAGAAGGGGTTTATTGAGAGGTGCATTGCTAAGCTAAGGCCAAGGCCTTCTGCTGCATAG 405 0.484 FIGISEANTWEVDPACPQSSGPYYPEVKIGDLSLATIVGRSHSAHSVLGTPEFMASELYEKYTEMVDIYSFGMCVLEMVTLEIPYSECDNVVKVYKKVCSGVRPQSLKKIKDAEVKKGFIERCIAKLRPRPSAA 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212385g00003 134 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 26 133 - -
Stsc212385g00003 134 SUPERFAMILY Protein kinase-like (PK-like) 26 112 IPR011009 -
Stsc212385g00003 134 ProSiteProfiles Protein kinase domain profile. 1 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc212385g00003 134 Pfam Protein kinase domain 26 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc212385g00003 134 Gene3D Transferase(Phosphotransferase) domain 1 13 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212385g00003 Stsc-Chr212385 20099 22479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212385g00003 26 134 MAP Kinase Kinase Kinase AT5G55560 69.091 1.41e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Stsc212385g00003 Pkinase 4.7e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212385g00003 K08867 - gmx:100782039 176.407