Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212376g00001 ATGGTGGGGAATAATCAACCGGAAAGGGAAAGGAGGAATAAAGATTGGATTAAAGTTCTTATGAATAGCAATGGGCACTGTGATAATCATCCTGATCTTCGTTCTAAAGAGAAGAATTTTTTCTGTGTAGACTGTGCAGTTAGAATGTGTAAGAACTGTAAGGAAGCTCATTCCCTGCACAGAAGGTTTCAGATATACAAATATTCCTATCAGGATGTGTTCCGCCATTCCGAGCTGCAGAAGTACTTTGACTGCTCAAAAATACAGACTTACATATCCAACAATGAAAGGATTGTGCATCTCAAACCCCGACCTTCAACTAATAAACCTAAAACCTCTGATCTAAGCCCTGATTCTAAATGCAAAGAATACAACTTTTCTTCAAGAACAAAGCCTGGAGGTACATGTGAAAAATGTGGGAAGCACTTACAAGATGAGAGGAATCGCTTCTGCTCTATTACATGCAAGGTGTCAGTGCTTCCCTTGGAAGCCCAAAACCAAGATCACAATCAATGTTCACAAAGGAGTTCGGTAGAGTCTGCTAGTCAAAGTACTAGATTCGTCAACACTCCAAAATCAGAAGGTAGTGATTTTACTTTAGATAACCAGAATTCAGAACCAGAGTCATCTTTATCTGAAGCTGAGCCATATGGATGGGTTGATGTTGTTAACTACAGAAAGCGCCCAAGGAAAACAGCCCCTCAAAGGCCTATTTTTGTTTTCATGTCATAA 732 0.3975 MVGNNQPERERRNKDWIKVLMNSNGHCDNHPDLRSKEKNFFCVDCAVRMCKNCKEAHSLHRRFQIYKYSYQDVFRHSELQKYFDCSKIQTYISNNERIVHLKPRPSTNKPKTSDLSPDSKCKEYNFSSRTKPGGTCEKCGKHLQDERNRFCSITCKVSVLPLEAQNQDHNQCSQRSSVESASQSTRFVNTPKSEGSDFTLDNQNSEPESSLSEAEPYGWVDVVNYRKRPRKTAPQRPIFVFMS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212376g00001 243 MobiDBLite consensus disorder prediction 169 213 - -
Stsc212376g00001 243 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 236 - -
Stsc212376g00001 243 ProSiteProfiles Zinc finger B-box type profile. 22 65 IPR000315 GO:0008270
Stsc212376g00001 243 SMART bboxneu5 22 65 IPR000315 GO:0008270
Stsc212376g00001 243 Pfam PLATZ transcription factor 67 157 IPR006734 -
Stsc212376g00001 243 MobiDBLite consensus disorder prediction 169 211 - -
Stsc212376g00001 243 MobiDBLite consensus disorder prediction 100 119 - -
Stsc212376g00001 243 Pfam B-box zinc finger 23 62 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212376g00001 Stsc-Chr212376 156 2402 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Stsc212376g00001 PLATZ 1.7e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212376g00001 - - gmx:100815813 347.821