Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212367g00001 ATGGCAAATGAAGGTTCAGGATCAGTGAAGGTTGTTGATACATGGAAGACAAGGTTAGCCCTGTTAATGGGGCCTCTAATCTATGGTGCATACCCTGTCATTACAAAAGTTGCACTCAATGATGGTGTCAACCAACTAGTCTTCTGTGTCTACAGAGATCTCATTGGCCTTTTAGTCCTTTCTCCTTGTGCTTTTTTCCTAGAAAGGCAGAAGCGACCACCGGTTACTAAGCACCTACTCTTCTCATTCTTCTTGCTTGGGTTAATTGGGATATTTGGCAACCAGCTTTTGTATGTTCTTGGTCTAAAATTGACTAATGCAACATACACAGCAGCTGCACAGCCAACCATTCCAGTCTTTACATTTCTGTTTTCTGCAATCATAGGCACAGAGAAAGTGAACTTGCTAAGATATGAGGGTATGGCAAAGGTTGTAGGGACTATTATATGTGTCTCTGGAGCCATATCAATGGTGCTGTATCGCGGTCCGGTTGTTATAGGAAATTCAGAAACAGGAATGGATCATGTAACTCAGAATTCATCTGGATTGTTAATGGATGGGTTGAAGGATATAGGCATTGACCCATTCAGTGTTGGGGTTATCTGCTTAATAGGGAATTGCATGTGCATGGCTGTTTATCTATCCATTCAGGCAAAATTGTTGAAAAAGTATCCCACAAACCTGTCTCTCACAGCATATTCCTACTTCTTTGGAGCTGTATTAATGGTGATAGTCTCAATTTTCATGACTGATGGGATAACTGACTGGACTTTAACACCGTCGGAAATACTCGCCGTTCTATATGGAGGAGTGGTTGCATCTGCCCTTGGTTATGGACTTCTAGCATGGGGTAACAAGATTGTAGGGCCAACAGTGGTTTCCCTTTATAACTCCCTTCAACCTGCATTCTCTACCCTGCTCTCCCTAATCTTCCTTGGAAGTCCTGTTTACCTGGGAAGCATACTGGGAGGAAGTGCTATCCTTGTTGGCCTATACATGGTTATTTGGGGATCTTACAAAGAAAAGCAAGCAGATGCTAATCAAGTTATTCCTTGTGATTCTTGTGTGTCTGAGCCACTTATTCACAAGACGACACTCTGTTAA 1104 0.4239 MANEGSGSVKVVDTWKTRLALLMGPLIYGAYPVITKVALNDGVNQLVFCVYRDLIGLLVLSPCAFFLERQKRPPVTKHLLFSFFLLGLIGIFGNQLLYVLGLKLTNATYTAAAQPTIPVFTFLFSAIIGTEKVNLLRYEGMAKVVGTIICVSGAISMVLYRGPVVIGNSETGMDHVTQNSSGLLMDGLKDIGIDPFSVGVICLIGNCMCMAVYLSIQAKLLKKYPTNLSLTAYSYFFGAVLMVIVSIFMTDGITDWTLTPSEILAVLYGGVVASALGYGLLAWGNKIVGPTVVSLYNSLQPAFSTLLSLIFLGSPVYLGSILGGSAILVGLYMVIWGSYKEKQADANQVIPCDSCVSEPLIHKTTLC 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212367g00001 367 PANTHER WAT1-RELATED PROTEIN 19 342 IPR030184 GO:0016020|GO:0022857
Stsc212367g00001 367 Pfam EamA-like transporter family 199 335 IPR000620 GO:0016020
Stsc212367g00001 367 Pfam EamA-like transporter family 19 151 IPR000620 GO:0016020
Stsc212367g00001 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 340 - -
Stsc212367g00001 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212367g00001 Stsc-Chr212367 733 3209 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212367g00001 100 363 Nodulin-like Gene Family AT5G45370 53.285 3.95e-99 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212367g00001 - - psat:127119930 441.039