Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212337g00003 ATGGATGGAGGAAGAGACTCTGAAATTGCGATGGGAGCTTATCAACCGCACCATTTGGCTACCGGCCAGGGTGGTGCGAAAGGCCAGATCCATGGCTTTCGCATGTCCCTATGGTATGAGCACCTCGGCAAACATGACGACGTCTTCCTCAACCCTGAAGGCGAAGAATGTATTAAGAAAGTGAACCAACTTGCTGGAGAGTATTTTAATGAATATGATAGGAAGTCACCCATACAAGATCTTTCTGGGCACCTGCTCCATTATCCAATTAAAATTTCTGCAGAGGGAACTGTCACAAATATCGAAAATTTGGAGCTCTTCCCCCACACGAATGCTCATATTCTAGGCAACAACGCCCCTGATATAGTTACTGATTTCACTCCGGATCGTGTGTTTGACCTTAACAAGTCTCACGTATCGTGCATTGAGTTGTACATTGAGTTTGAACAAGTGGCTGTGAAAGCTGTTGAAGATGTGTCTCATGTGGACTTGGAGAGACAGGCAGTGTTAGAAGAAATGTACAGTGGAAGTGAAGACGAATTCGAGGCAATCTACGAAGCCCCAGATGAAGAGGAAGGAAATGAAGGAGTAGATGTAGCAGTGCAAAATGTCACTAACCAACTTGCAAGCCAGCATCCCTTCGGCGTCCCTTCCTGTATGCGTCAGTTGGACGATGTAGACATCAATGCGCCTGAGTTTCCTGAGTATGTAAACATAGTTGTTGCTGCTCTTGAAAATGGTGAATTCATGATGGGAATGGAATACATTTTCAGAAAGGCAGTGGTAGCTGCAATTAGGAAATACATTATATCTAGAGGAGTTGACTACACGGTGTGGGAATCTAAGCCCCAGATCATTTATGCGAAATGCAAACTGTATGAAAATGGGTGCGATTGGCTTCCAAGTGGTCCCCCTCATCAGAACCCAAAATCCTTCGAAGTTCGCTAA 948 0.4494 MDGGRDSEIAMGAYQPHHLATGQGGAKGQIHGFRMSLWYEHLGKHDDVFLNPEGEECIKKVNQLAGEYFNEYDRKSPIQDLSGHLLHYPIKISAEGTVTNIENLELFPHTNAHILGNNAPDIVTDFTPDRVFDLNKSHVSCIELYIEFEQVAVKAVEDVSHVDLERQAVLEEMYSGSEDEFEAIYEAPDEEEGNEGVDVAVQNVTNQLASQHPFGVPSCMRQLDDVDINAPEFPEYVNIVVAALENGEFMMGMEYIFRKAVVAAIRKYIISRGVDYTVWESKPQIIYAKCKLYENGCDWLPSGPPHQNPKSFEVR 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212337g00003 315 Pfam Phospholipase D C terminal 46 117 IPR024632 -
Stsc212337g00003 315 PANTHER PHOSPHOLIPASE D 1 118 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212337g00003 Stsc-Chr212337 4898 10509 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212337g00003 1 128 Phospholipase D Gene Family (Wang group) AT1G52570 56.250 7.37e-41 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212337g00003 K01115 - aip:110262556 174.481