Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212337g00001 ATGGAGGAGGGAGTTCTGTTGCATGGAGACATGGATGTAACCATTTGTCCGACTTCCAACCTAAAAGCCGTTATTGACAATGCATCGGTTGAAATTGAAAGCAGACGTGTAAAAGACCCTTCTAACCCTAAACAGGAGGAGGAGTCTTTTTACATTCGATGTGCACATAAGGCATCAAACATCATATTAACCATACGATCTGAAAGATTTCATTTTGTTGGCCGAGATGTTGTTATTGGATATGCACAAGTGCCTGTTAAGGATGTATATGAGGATATCAAAAATGGTGGTGAAGTAAGCAAATGGGTTGAAATTGTGGATCGTGCAAAAAAGGCCCATAGCTGGAACTCTACAGATCTGTTTCAAGCTACGATTCTTTGA 381 0.4042 MEEGVLLHGDMDVTICPTSNLKAVIDNASVEIESRRVKDPSNPKQEEESFYIRCAHKASNIILTIRSERFHFVGRDVVIGYAQVPVKDVYEDIKNGGEVSKWVEIVDRAKKAHSWNSTDLFQATIL 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212337g00001 126 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 21 110 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212337g00001 Stsc-Chr212337 1474 2307 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212337g00001 19 107 Phospholipase D Gene Family (Wang group) AT3G15730 41.758 2.68e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212337g00001 K01115 - nnu:104595387 64.6994