Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212335g00004 ATGAATACAGATGAACCAGAAACATTCAGCAACAAGAAACAAGCACTTGAAGCCAGTAATCCATTTCCAGGAGTTTTCCATCTGAATGTTTCTCCATGGGACACCAATTTCGGGTTGCACTCTGTCACAAGTCAATTTTCTGACCGTCTCTTTGGATCTGATCTTGGGCGTGGAAGTTTGAATGTGGCTAGGAGGGATGTTGAGAATCGATATGTTAATGAACCATCTATTGGTTTGTCAAGATCTCATCCCATTGCAGACACTTCATCAGATCCCAATTTCAATATCACCAGAAAGGTTAAAGTCAATCAAGTCAAGGATTCTTTCAATTTGTTTCCCTCATCCATAGGCTCAAATTATAACAATGAGAATGATAATATCATTGCAATGGGAAGTGGAATAAGCAAGACCAATAGCAATCCTGATTCAATGGGTCATCATGCCTTCAATATAGGGGATGGGAGTTCTATGCCGATGCACCAAACTTATGGCTTGTCAATGAGTGAGCCCTTAAACAGGACAGATTTCGTATCCATGGATCAGTCATACCAAAAAGTTGACAGCAATTTGATATCTCTAGGAAGCTCATCATATCCAAAGGGGCATGAGAACTTCATACCAATGGGTGCAATTTACAGTAAATCAGCAGAAGATTTCATGAATATTAGTCCTTTCTATGGCAAAGGCATTGATCATATGTTATCCTTGGGTCCAACAGGAAATTCTAGCTCTTCACTGGCTGCTCATGCCTACAATAACGGCGAAAGCGGTTCCATGCCCTTTGTTGCTCTTACTGGTAATCCTGAACTCGAACCCAATCCCTCTGTTGGAATCATGAATGGCTATAATCTATTGATGGAGAACCAGAGTTTATTAGCTGAAGGTCTTGATAGCCAGAATAAGGATCAGACTAGTCCAAATGCCGAACAACCTGTGAAAACCACTCAAACAACTGGTACTCAAACTGATACTACTACAAAGAAGAACAAAGAGAAGAAAACCAGGAAGCCTTCATCTAACAACTTCCCTTCAAATGTCAAAAGCTTGTTGGCAACTGGTATTTATGATGGTGTTCCTGTGAAGTATGTTTCGTGGTCGCGCGAGAAAACCCTGGGAGCAGTGATAAAAGGAACTGGGTATGTGTGTTCATGTGATGAATGCAAGGAACCAAAGCCTCTAAATGCTTATGAGTTTGAGCGTCATGCTGGTTCCAAGACCAAACATCCTAACAACCACATATACTTTGAGAATGGAAAAACCGTCTATGGTGTGGTTCAAGAGCTGAAAAACACTCCACAGGAGATGCTCTTTGATGTAATTCAGAATATCACTGGCTCCACTGTCAACCAGAAGAACTTTCAGACTTGGAAAGCATCATATCAAGCTGCTTCAAAAGAGCTTCAGCGTATATATGGAACAAATGAAGTGACAACCCAACAATCATGA 1446 0.4094 MNTDEPETFSNKKQALEASNPFPGVFHLNVSPWDTNFGLHSVTSQFSDRLFGSDLGRGSLNVARRDVENRYVNEPSIGLSRSHPIADTSSDPNFNITRKVKVNQVKDSFNLFPSSIGSNYNNENDNIIAMGSGISKTNSNPDSMGHHAFNIGDGSSMPMHQTYGLSMSEPLNRTDFVSMDQSYQKVDSNLISLGSSSYPKGHENFIPMGAIYSKSAEDFMNISPFYGKGIDHMLSLGPTGNSSSSLAAHAYNNGESGSMPFVALTGNPELEPNPSVGIMNGYNLLMENQSLLAEGLDSQNKDQTSPNAEQPVKTTQTTGTQTDTTTKKNKEKKTRKPSSNNFPSNVKSLLATGIYDGVPVKYVSWSREKTLGAVIKGTGYVCSCDECKEPKPLNAYEFERHAGSKTKHPNNHIYFENGKTVYGVVQELKNTPQEMLFDVIQNITGSTVNQKNFQTWKASYQAASKELQRIYGTNEVTTQQS 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212335g00004 481 MobiDBLite consensus disorder prediction 296 345 - -
Stsc212335g00004 481 Pfam Tify domain binding domain 374 428 IPR032308 -
Stsc212335g00004 481 PANTHER AUTOIMMUNE REGULATOR 4 466 - -
Stsc212335g00004 481 MobiDBLite consensus disorder prediction 296 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212335g00004 Stsc-Chr212335 14777 16709 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212335g00004 332 461 PHD Transcription Factor Family AT3G53680 53.846 2.40e-40 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212335g00004 - - adu:107486410 621.313