Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212334g00003 ATGCGTTCTAGCAGTACCTTGGCTTTAGCCCAATTGTTTGGCTTCCTTGGCCTCATACTCTTGCTTGTTTGGTTGCTGCATTACCGCGGAGGAATCGAGTATGATTCTGAGAATCCCGATCGGGTCTTCAATGTTCATCCTTTTATGATGTACTTTGGGTTCATTTTCCTTGTTGGCCAAGCAATAATGACACACCACGTGGTAACAATAGAACCGACAACACGAAAGACAATTCACGCAATGCTTCATTTGATTGCCATAGTTCTTGGAATTGTTGGCATATGTGCAGTATTCAAGTACCATGATATGATCAACTTGGTTGATGTATACAGCCTGCACTCATGGATTGGGCTCGGTACCTTCTGCTTGTTTGGCATACAGTGGCTATTTGGACTCATGTTCATGTTTGGAGGTAGAGAAACAAGGGTTGGAATGTCTCCATGGCACATAGCTGGGGGTAGAGCACTGTTGTACATGGCAATATGTGCTGCAATGACGGGTTTCATGAATAGGTATGCAATGTTGAAACTATTACCGCACGAGAGAGAGACTCATTTGATCAACTTCACTGCCCTTGCAATCCTCTTGTTTGGGGTCTTTGTTGATATCTCAGTTGGTTTGGCCCATTACGGCCACTGA 639 0.4429 MRSSSTLALAQLFGFLGLILLLVWLLHYRGGIEYDSENPDRVFNVHPFMMYFGFIFLVGQAIMTHHVVTIEPTTRKTIHAMLHLIAIVLGIVGICAVFKYHDMINLVDVYSLHSWIGLGTFCLFGIQWLFGLMFMFGGRETRVGMSPWHIAGGRALLYMAICAAMTGFMNRYAMLKLLPHERETHLINFTALAILLFGVFVDISVGLAHYGH 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212334g00003 212 PANTHER CYTOCHROME B561-RELATED 4 205 IPR043205 GO:0016491
Stsc212334g00003 212 ProSiteProfiles Cytochrome b561 domain profile. 9 206 IPR006593 -
Stsc212334g00003 212 Pfam Eukaryotic cytochrome b561 45 171 IPR006593 -
Stsc212334g00003 212 FunFam Cytochrome b reductase 1 1 211 - -
Stsc212334g00003 212 CDD Cyt_b561_ACYB-1_like 36 176 - -
Stsc212334g00003 212 Gene3D - 1 209 - -
Stsc212334g00003 212 SMART 561_7 45 168 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212334g00003 Stsc-Chr212334 13910 14920 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212334g00003 3 210 Chloroplast and Mitochondria Gene Families AT1G14730 56.398 8.71e-78 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212334g00003 K08360 - gmx:100790661 284.648