Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc212329g00001 ATGAAGGAGGGTAGTGGTGGTGGTAGGAAGCAAGGTGCAATGTCGCCGTGTGCGGCGTGCAAGCTTCTCCGGCGGCGATGCGCCAAGGATTGCGTGTTTGCACCGTATTTTCCAGCGGATGAGCCACAGAAATTTGGGAGTGTCCACAAGGTTTTTGGTGCTAGCAATGTCAACAAGATGTTACAGGAATTACCGGAGCACCAAAGAAGTGATGCAGTGAGTTCAATGGTGTATGAAGCAAATGCAAGAGTAAGAGACCCTGTGTATGGATGTGTGGGTGCAATTTCTTGTCTTCAGCAACAAGTTGATGTTCTCCAAACCCAATTGGCTCTTGCTCAAGCCGAAGTTGTTCACATGAGAATGCGCCAATTCCCATCTTCTAATAATAATCATGACCCTCCAATTTCATCTCCATCAAATCATCACCATCCATCTATTTCATCACCATCAGAGAATAACAACAATAACAATTTGTGCCAGACCAAGTCCCTTTTTTCCATGGACATGGTCCTTGATCATCAATCCAACATGGGACAGTCCCTTTGGTCATGCTAG 555 0.4595 MKEGSGGGRKQGAMSPCAACKLLRRRCAKDCVFAPYFPADEPQKFGSVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISCLQQQVDVLQTQLALAQAEVVHMRMRQFPSSNNNHDPPISSPSNHHHPSISSPSENNNNNNLCQTKSLFSMDMVLDHQSNMGQSLWSC 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc212329g00001 184 MobiDBLite consensus disorder prediction 124 159 - -
Stsc212329g00001 184 Coils Coil 95 115 - -
Stsc212329g00001 184 ProSiteProfiles LOB domain profile. 15 116 IPR004883 -
Stsc212329g00001 184 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 14 151 - -
Stsc212329g00001 184 Pfam Lateral organ boundaries (LOB) domain 16 113 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc212329g00001 Stsc-Chr212329 14557 19533 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc212329g00001 1 184 AS2 family AT1G31320 67.553 1.94e-68 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc212329g00001 LOB 1.9e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc212329g00001 - - qsa:O6P43_001193 245.743